Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC092798.1-201ENST00000458542 409 ntBASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 AC139453.3-201ENST00000493276 369 ntBASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 SNORA31.18-201ENST00000517043 134 ntBASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 RNA5SP108-201ENST00000605921 117 ntBASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 AC112198.2-201ENST00000426589 6996 ntBASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB9Q9Y5E1 AC004925.1-201ENST00000624256 2706 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 OR9K1P-202ENST00000641111 3217 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-222P-201ENST00000362438 107 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-78P-201ENST00000362897 107 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 SNORA48.4-201ENST00000391089 134 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 SNORA53-201ENST00000391141 249 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 CYP4F29P-201ENST00000420685 446 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AC091390.1-201ENST00000433904 331 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 MRPL42P6-201ENST00000486397 371 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 RN7SL814P-201ENST00000487715 300 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AC074198.2-201ENST00000508153 258 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-572P-201ENST00000516724 80 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 SNORA31.20-201ENST00000517111 133 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 BNIP3P1-201ENST00000547295 580 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AC010928.2-201ENST00000588017 287 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AC006272.2-201ENST00000594725 163 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AC105254.2-201ENST00000603636 436 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 uc_338.18-201ENST00000615451 175 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 MIR6839-201ENST00000620425 113 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 SCARNA4-201ENST00000629045 128 ntBASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB9Q9Y5E1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AL034549.2-201ENST00000618285 3373 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 HAUS6P2-201ENST00000433254 2404 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC233981.2-201ENST00000611524 1614 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-326P-201ENST00000365480 107 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-17P-201ENST00000384245 107 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-18P-201ENST00000384527 107 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AL356867.1-201ENST00000429623 299 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 ANP32BP2-201ENST00000454525 545 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 RPS29P33-201ENST00000456717 146 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC010326.1-201ENST00000462726 602 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-1278P-201ENST00000516130 107 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AP004371.1-201ENST00000525240 214 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 MZT1P2-201ENST00000604387 248 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC072026.1-201ENST00000605023 201 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 BRDTP1-201ENST00000605735 677 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC093799.2-201ENST00000610062 578 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 MIR7641-1-201ENST00000627518 61 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AC010300.1-201ENST00000600671 5134 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AL359693.1-201ENST00000614959 2407 ntBASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB9Q9Y5E1 AP001029.2-203ENST00000589795 4910 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms