RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
SCARNA4-201ENST00000629045 CHIC1Q5VXU3 224 aa13.63□□□□□ -0.23
SCARNA4-201ENST00000629045 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
SCARNA4-201ENST00000629045 SENP3Q9H4L4 574 aaPredicted RBP11.87□□□□□ -0.51
SCARNA4-201ENST00000629045 FOXD1Q16676 465 aa11.06□□□□□ -0.64
SCARNA4-201ENST00000629045 PLPPR3Q6T4P5 718 aa11.03□□□□□ -0.64
SCARNA4-201ENST00000629045 ADRA2BP18089 450 aa10.62□□□□□ -0.71
SCARNA4-201ENST00000629045 PPP6R1Q9UPN7 881 aa10.62□□□□□ -0.71
SCARNA4-201ENST00000629045 PIAS4Q8N2W9 510 aaPredicted RBP10.43□□□□□ -0.74
SCARNA4-201ENST00000629045 MSH5O43196 834 aa10.16□□□□□ -0.78
SCARNA4-201ENST00000629045 PPP4R3CPQ6ZMV5 832 aa9.74□□□□□ -0.85
SCARNA4-201ENST00000629045 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
SCARNA4-201ENST00000629045 SCAF1Q9H7N4 1312 aaKnown RBP9.61□□□□□ -0.87
SCARNA4-201ENST00000629045 KCNA4P22459 653 aa9.51□□□□□ -0.89
SCARNA4-201ENST00000629045 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
SCARNA4-201ENST00000629045 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
SCARNA4-201ENST00000629045 NCBP3Q53F19 620 aaKnown RBP9.42□□□□□ -0.9
SCARNA4-201ENST00000629045 POTEDQ86YR6 584 aa9.38□□□□□ -0.91
SCARNA4-201ENST00000629045 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
SCARNA4-201ENST00000629045 RNF216Q9NWF9 866 aaPredicted RBP9.27□□□□□ -0.93
SCARNA4-201ENST00000629045 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
SCARNA4-201ENST00000629045 DCAF8L1A6NGE4 600 aa9.12□□□□□ -0.95
SCARNA4-201ENST00000629045 SLC4A1APQ9BWU0 796 aaKnown RBP9.02□□□□□ -0.97
SCARNA4-201ENST00000629045 DNAJC5BQ9UF47 199 aa8.99□□□□□ -0.97
SCARNA4-201ENST00000629045 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
SCARNA4-201ENST00000629045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCARNA4-201ENST00000629045 EHMT2Q96KQ7 1210 aa8.78□□□□□ -1
SCARNA4-201ENST00000629045 ZBTB22O15209 634 aa8.77□□□□□ -1.01
SCARNA4-201ENST00000629045 RNF39Q9H2S5 420 aa8.73□□□□□ -1.01
SCARNA4-201ENST00000629045 FOXD4L1Q9NU39 408 aa8.73□□□□□ -1.01
SCARNA4-201ENST00000629045 U3KPZ7 1027 aaPredicted RBP8.72□□□□□ -1.01
SCARNA4-201ENST00000629045 CSRNP3Q8WYN3 585 aa8.65□□□□□ -1.02
SCARNA4-201ENST00000629045 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
SCARNA4-201ENST00000629045 C1QBPQ07021 282 aaKnown RBP8.59□□□□□ -1.03
SCARNA4-201ENST00000629045 CACNB1Q02641 598 aaPredicted RBP8.54□□□□□ -1.04
SCARNA4-201ENST00000629045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.51□□□□□ -1.05
SCARNA4-201ENST00000629045 HNRNPUL2Q1KMD3 747 aaKnown RBP8.51□□□□□ -1.05
SCARNA4-201ENST00000629045 SPINK5Q9NQ38 1064 aaPredicted RBP8.51□□□□□ -1.05
SCARNA4-201ENST00000629045 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
SCARNA4-201ENST00000629045 CAPN15O75808 1086 aa8.45□□□□□ -1.06
SCARNA4-201ENST00000629045 ATF5Q9Y2D1 282 aaPredicted RBP8.44□□□□□ -1.06
SCARNA4-201ENST00000629045 APLP2Q06481 763 aa8.42□□□□□ -1.06
SCARNA4-201ENST00000629045 TRHP20396 242 aaPredicted RBP8.41□□□□□ -1.06
SCARNA4-201ENST00000629045 ATXN8OSP0DMR3 200 aa8.36□□□□□ -1.07
SCARNA4-201ENST00000629045 ZNF219Q9P2Y4 722 aaPredicted RBP8.35□□□□□ -1.07
SCARNA4-201ENST00000629045 ABCB7O75027 752 aa8.32□□□□□ -1.08
SCARNA4-201ENST00000629045 DSG3P32926 999 aa8.3□□□□□ -1.08
SCARNA4-201ENST00000629045 POLA2Q14181 598 aa8.24□□□□□ -1.09
SCARNA4-201ENST00000629045 MKRN4PQ13434 485 aaPredicted RBP8.07□□□□□ -1.12
SCARNA4-201ENST00000629045 ZBTB12Q9Y330 459 aaPredicted RBP8.05□□□□□ -1.12
SCARNA4-201ENST00000629045 FBLN2P98095 1184 aa8.02□□□□□ -1.13
SCARNA4-201ENST00000629045 OSCARQ8IYS5 282 aa8.01□□□□□ -1.13
SCARNA4-201ENST00000629045 RBM42Q9BTD8 480 aaKnown RBP7.87□□□□□ -1.15
SCARNA4-201ENST00000629045 SPDYE2BA6NHP3 402 aa7.85□□□□□ -1.15
SCARNA4-201ENST00000629045 SPDYE6P0CI01 402 aa7.85□□□□□ -1.15
SCARNA4-201ENST00000629045 SPDYE2Q495Y8 402 aa7.85□□□□□ -1.15
SCARNA4-201ENST00000629045 SPDYE4A6NLX3 237 aa7.84□□□□□ -1.15
SCARNA4-201ENST00000629045 FKBP8Q14318 412 aa7.83□□□□□ -1.16
SCARNA4-201ENST00000629045 ZNF692Q9BU19 519 aaPredicted RBP7.83□□□□□ -1.16
SCARNA4-201ENST00000629045 SSUH2Q9Y2M2 353 aa7.81□□□□□ -1.16
SCARNA4-201ENST00000629045 AKT1S1Q96B36 256 aa7.77□□□□□ -1.17
SCARNA4-201ENST00000629045 PABPN1Q86U42 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
SCARNA4-201ENST00000629045 REM2Q8IYK8 340 aaPredicted RBP7.73□□□□□ -1.17
SCARNA4-201ENST00000629045 PROM2Q8N271 834 aa7.68□□□□□ -1.18
SCARNA4-201ENST00000629045 PITPNM1O00562 1244 aa7.67□□□□□ -1.18
SCARNA4-201ENST00000629045 CLEC11AQ9Y240 323 aa7.64□□□□□ -1.19
SCARNA4-201ENST00000629045 SPDYE1Q8NFV5 336 aaPredicted RBP7.63□□□□□ -1.19
SCARNA4-201ENST00000629045 CHRDL2Q6WN34 429 aa7.6□□□□□ -1.19
SCARNA4-201ENST00000629045 STAG3Q9UJ98 1225 aa7.54□□□□□ -1.2
SCARNA4-201ENST00000629045 PRR29P0C7W0 189 aa7.53□□□□□ -1.2
SCARNA4-201ENST00000629045 PIP4P2Q8N4L2 257 aa7.5□□□□□ -1.21
SCARNA4-201ENST00000629045 FXR2P51116 673 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCARNA4-201ENST00000629045 CHADLQ6NUI6 762 aa7.49□□□□□ -1.21
SCARNA4-201ENST00000629045 FBXO3Q9UK99 471 aa7.49□□□□□ -1.21
SCARNA4-201ENST00000629045 PRKAR2AP13861 404 aaKnown RBP7.46□□□□□ -1.22
SCARNA4-201ENST00000629045 VASPP50552 380 aaPredicted RBP7.45□□□□□ -1.22
SCARNA4-201ENST00000629045 CREBZFQ9NS37 354 aa7.45□□□□□ -1.22
SCARNA4-201ENST00000629045 MIER1Q8N108 512 aa7.43□□□□□ -1.22
SCARNA4-201ENST00000629045 PLCD3Q8N3E9 789 aa7.42□□□□□ -1.22
SCARNA4-201ENST00000629045 POTEHQ6S545 545 aa7.41□□□□□ -1.22
SCARNA4-201ENST00000629045 MNX1P50219 401 aaPredicted RBP7.37□□□□□ -1.23
SCARNA4-201ENST00000629045 FARP1Q9Y4F1 1045 aaPredicted RBP7.37□□□□□ -1.23
SCARNA4-201ENST00000629045 IFNLR1Q8IU57 520 aaPredicted RBP7.35□□□□□ -1.23
SCARNA4-201ENST00000629045 PLEKHG5O94827 1062 aa7.34□□□□□ -1.23
SCARNA4-201ENST00000629045 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
SCARNA4-201ENST00000629045 ZBTB47Q9UFB7 747 aaPredicted RBP7.29□□□□□ -1.24
SCARNA4-201ENST00000629045 NPM1P06748 294 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCARNA4-201ENST00000629045 HAX1O00165 279 aa7.26□□□□□ -1.25
SCARNA4-201ENST00000629045 RASEFQ8IZ41 740 aa7.26□□□□□ -1.25
SCARNA4-201ENST00000629045 CD44P16070 742 aaKnown RBP7.25□□□□□ -1.25
SCARNA4-201ENST00000629045 NUBP1P53384 320 aa7.25□□□□□ -1.25
SCARNA4-201ENST00000629045 C19orf67A6NJJ6 358 aa7.24□□□□□ -1.25
SCARNA4-201ENST00000629045 EVX2Q03828 476 aa7.24□□□□□ -1.25
SCARNA4-201ENST00000629045 SPOCK2Q92563 424 aa7.24□□□□□ -1.25
SCARNA4-201ENST00000629045 TSPYL2Q9H2G4 693 aaPredicted RBP7.22□□□□□ -1.25
SCARNA4-201ENST00000629045 ZRANB1Q9UGI0 708 aa7.2□□□□□ -1.26
SCARNA4-201ENST00000629045 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
SCARNA4-201ENST00000629045 PAK3O75914 559 aaPredicted RBP7.18□□□□□ -1.26
SCARNA4-201ENST00000629045 PHF12Q96QT6 1004 aa7.17□□□□□ -1.26
SCARNA4-201ENST00000629045 DCAF8Q5TAQ9 597 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms