RNA–Protein interactions for RNA: ENST00000362438.1

RNU6-222P-201, Transcript of RNA, U6 small nuclear 222, pseudogene, humanhuman

BASIC

Gene RNU6-222P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-222P-201ENST00000362438 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
RNU6-222P-201ENST00000362438 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.17
RNU6-222P-201ENST00000362438 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
RNU6-222P-201ENST00000362438 PHF23Q9BUL5 403 aaPredicted RBP12.21□□□□□ -0.45
RNU6-222P-201ENST00000362438 FOXD1Q16676 465 aa11.43□□□□□ -0.58
RNU6-222P-201ENST00000362438 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
RNU6-222P-201ENST00000362438 PIAS4Q8N2W9 510 aaPredicted RBP10.82□□□□□ -0.68
RNU6-222P-201ENST00000362438 ADRA2BP18089 450 aa10.81□□□□□ -0.68
RNU6-222P-201ENST00000362438 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
RNU6-222P-201ENST00000362438 MSH5O43196 834 aa10.76□□□□□ -0.69
RNU6-222P-201ENST00000362438 SCAF1Q9H7N4 1312 aaKnown RBP10.09□□□□□ -0.79
RNU6-222P-201ENST00000362438 POTEDQ86YR6 584 aa9.96□□□□□ -0.82
RNU6-222P-201ENST00000362438 PPP4R3CPQ6ZMV5 832 aa9.94□□□□□ -0.82
RNU6-222P-201ENST00000362438 DMRT2Q9Y5R5 561 aa9.85□□□□□ -0.83
RNU6-222P-201ENST00000362438 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
RNU6-222P-201ENST00000362438 NCBP3Q53F19 620 aaKnown RBP9.75□□□□□ -0.85
RNU6-222P-201ENST00000362438 CNKSR2Q8WXI2 1034 aa9.75□□□□□ -0.85
RNU6-222P-201ENST00000362438 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
RNU6-222P-201ENST00000362438 HOXD11P31277 338 aaPredicted RBP9.58□□□□□ -0.88
RNU6-222P-201ENST00000362438 NPM3O75607 178 aaKnown RBP9.47□□□□□ -0.89
RNU6-222P-201ENST00000362438 KCNA4P22459 653 aa9.47□□□□□ -0.89
RNU6-222P-201ENST00000362438 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
RNU6-222P-201ENST00000362438 DNAJC5BQ9UF47 199 aa9.31□□□□□ -0.92
RNU6-222P-201ENST00000362438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.16□□□□□ -0.94
RNU6-222P-201ENST00000362438 RNF39Q9H2S5 420 aa9.12□□□□□ -0.95
RNU6-222P-201ENST00000362438 C1QBPQ07021 282 aaKnown RBP9.07□□□□□ -0.96
RNU6-222P-201ENST00000362438 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
RNU6-222P-201ENST00000362438 CACNB1Q02641 598 aaPredicted RBP9.03□□□□□ -0.96
RNU6-222P-201ENST00000362438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.93□□□□□ -0.98
RNU6-222P-201ENST00000362438 SLC4A2P04920 1241 aa8.93□□□□□ -0.98
RNU6-222P-201ENST00000362438 APLP2Q06481 763 aa8.93□□□□□ -0.98
RNU6-222P-201ENST00000362438 HNRNPUL2Q1KMD3 747 aaKnown RBP8.93□□□□□ -0.98
RNU6-222P-201ENST00000362438 U3KPZ7 1027 aaPredicted RBP8.93□□□□□ -0.98
RNU6-222P-201ENST00000362438 MYCNP04198 464 aaPredicted RBP8.86□□□□□ -0.99
RNU6-222P-201ENST00000362438 FOXD4L1Q9NU39 408 aa8.86□□□□□ -0.99
RNU6-222P-201ENST00000362438 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
RNU6-222P-201ENST00000362438 CAPN15O75808 1086 aa8.76□□□□□ -1.01
RNU6-222P-201ENST00000362438 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
RNU6-222P-201ENST00000362438 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
RNU6-222P-201ENST00000362438 ZBTB22O15209 634 aa8.66□□□□□ -1.02
RNU6-222P-201ENST00000362438 TRHP20396 242 aaPredicted RBP8.65□□□□□ -1.02
RNU6-222P-201ENST00000362438 ATXN8OSP0DMR3 200 aa8.61□□□□□ -1.03
RNU6-222P-201ENST00000362438 DSG3P32926 999 aa8.6□□□□□ -1.03
RNU6-222P-201ENST00000362438 EHMT2Q96KQ7 1210 aa8.57□□□□□ -1.04
RNU6-222P-201ENST00000362438 ABCB7O75027 752 aa8.51□□□□□ -1.05
RNU6-222P-201ENST00000362438 CSRNP3Q8WYN3 585 aa8.5□□□□□ -1.05
RNU6-222P-201ENST00000362438 ZBTB12Q9Y330 459 aaPredicted RBP8.47□□□□□ -1.05
RNU6-222P-201ENST00000362438 POLA2Q14181 598 aa8.45□□□□□ -1.06
RNU6-222P-201ENST00000362438 ATF5Q9Y2D1 282 aaPredicted RBP8.44□□□□□ -1.06
RNU6-222P-201ENST00000362438 RBM42Q9BTD8 480 aaKnown RBP8.35□□□□□ -1.07
RNU6-222P-201ENST00000362438 FBLN2P98095 1184 aa8.31□□□□□ -1.08
RNU6-222P-201ENST00000362438 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
RNU6-222P-201ENST00000362438 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.1
RNU6-222P-201ENST00000362438 SPDYE6P0CI01 402 aa8.15□□□□□ -1.1
RNU6-222P-201ENST00000362438 SPDYE2Q495Y8 402 aa8.15□□□□□ -1.1
RNU6-222P-201ENST00000362438 AKT1S1Q96B36 256 aa8.14□□□□□ -1.11
RNU6-222P-201ENST00000362438 MKRN4PQ13434 485 aaPredicted RBP8.11□□□□□ -1.11
RNU6-222P-201ENST00000362438 ZNF692Q9BU19 519 aaPredicted RBP8.05□□□□□ -1.12
RNU6-222P-201ENST00000362438 SSUH2Q9Y2M2 353 aa8.02□□□□□ -1.13
RNU6-222P-201ENST00000362438 REM2Q8IYK8 340 aaPredicted RBP8□□□□□ -1.13
RNU6-222P-201ENST00000362438 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
RNU6-222P-201ENST00000362438 SPDYE1Q8NFV5 336 aaPredicted RBP7.96□□□□□ -1.14
RNU6-222P-201ENST00000362438 SPDYE4A6NLX3 237 aa7.94□□□□□ -1.14
RNU6-222P-201ENST00000362438 PITPNM1O00562 1244 aa7.91□□□□□ -1.14
RNU6-222P-201ENST00000362438 PABPN1Q86U42 306 aaKnown RBP eCLIP7.91□□□□□ -1.14
RNU6-222P-201ENST00000362438 POTEHQ6S545 545 aa7.89□□□□□ -1.15
RNU6-222P-201ENST00000362438 CLEC11AQ9Y240 323 aa7.87□□□□□ -1.15
RNU6-222P-201ENST00000362438 STAG3Q9UJ98 1225 aa7.86□□□□□ -1.15
RNU6-222P-201ENST00000362438 PRR29P0C7W0 189 aa7.8□□□□□ -1.16
RNU6-222P-201ENST00000362438 FXR2P51116 673 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU6-222P-201ENST00000362438 PIP4P2Q8N4L2 257 aa7.79□□□□□ -1.16
RNU6-222P-201ENST00000362438 FKBP8Q14318 412 aa7.76□□□□□ -1.17
RNU6-222P-201ENST00000362438 PROM2Q8N271 834 aa7.76□□□□□ -1.17
RNU6-222P-201ENST00000362438 PRKAR2AP13861 404 aaKnown RBP7.73□□□□□ -1.17
RNU6-222P-201ENST00000362438 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
RNU6-222P-201ENST00000362438 FBXO3Q9UK99 471 aa7.65□□□□□ -1.18
RNU6-222P-201ENST00000362438 CHADLQ6NUI6 762 aa7.63□□□□□ -1.19
RNU6-222P-201ENST00000362438 HAX1O00165 279 aa7.62□□□□□ -1.19
RNU6-222P-201ENST00000362438 FARP1Q9Y4F1 1045 aaPredicted RBP7.6□□□□□ -1.19
RNU6-222P-201ENST00000362438 NPM1P06748 294 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNU6-222P-201ENST00000362438 CREBZFQ9NS37 354 aa7.59□□□□□ -1.19
RNU6-222P-201ENST00000362438 ZBTB47Q9UFB7 747 aaPredicted RBP7.58□□□□□ -1.2
RNU6-222P-201ENST00000362438 PLCD3Q8N3E9 789 aa7.56□□□□□ -1.2
RNU6-222P-201ENST00000362438 MIER1Q8N108 512 aa7.55□□□□□ -1.2
RNU6-222P-201ENST00000362438 C19orf67A6NJJ6 358 aa7.54□□□□□ -1.2
RNU6-222P-201ENST00000362438 PAK3O75914 559 aaPredicted RBP7.54□□□□□ -1.2
RNU6-222P-201ENST00000362438 SP7Q8TDD2 431 aaPredicted RBP7.53□□□□□ -1.2
RNU6-222P-201ENST00000362438 CD44P16070 742 aaKnown RBP7.52□□□□□ -1.21
RNU6-222P-201ENST00000362438 CLCN6P51797 869 aa7.49□□□□□ -1.21
RNU6-222P-201ENST00000362438 MNX1P50219 401 aaPredicted RBP7.47□□□□□ -1.21
RNU6-222P-201ENST00000362438 VASPP50552 380 aaPredicted RBP7.47□□□□□ -1.21
RNU6-222P-201ENST00000362438 ZNF579Q8NAF0 562 aaKnown RBP7.43□□□□□ -1.22
RNU6-222P-201ENST00000362438 ZRANB1Q9UGI0 708 aa7.43□□□□□ -1.22
RNU6-222P-201ENST00000362438 KLHL34Q8N239 644 aa7.4□□□□□ -1.22
RNU6-222P-201ENST00000362438 EVX2Q03828 476 aa7.39□□□□□ -1.23
RNU6-222P-201ENST00000362438 FAM212AQ96EL1 285 aa7.39□□□□□ -1.23
RNU6-222P-201ENST00000362438 TSPYL2Q9H2G4 693 aaPredicted RBP7.36□□□□□ -1.23
RNU6-222P-201ENST00000362438 GABBR2O75899 941 aa7.35□□□□□ -1.23
RNU6-222P-201ENST00000362438 NUBP1P53384 320 aa7.33□□□□□ -1.24
RNU6-222P-201ENST00000362438 RASEFQ8IZ41 740 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms