RNA–Protein interactions for RNA: ENST00000635041.1

PRG4-206, Transcript of proteoglycan 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRG4, Length 4,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4-206ENST00000635041 NISCHQ9Y2I1 1504 aa9.48□□□□□ -0.89
PRG4-206ENST00000635041 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
PRG4-206ENST00000635041 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
PRG4-206ENST00000635041 ABCC9O60706 1549 aa8.48□□□□□ -1.05
PRG4-206ENST00000635041 SHROOM4Q9ULL8 1493 aa8.41□□□□□ -1.06
PRG4-206ENST00000635041 MYT1Q01538 1121 aa8.37□□□□□ -1.07
PRG4-206ENST00000635041 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
PRG4-206ENST00000635041 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
PRG4-206ENST00000635041 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
PRG4-206ENST00000635041 PABPN1Q86U42 306 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRG4-206ENST00000635041 CCDC180Q9P1Z9 1646 aa8.17□□□□□ -1.1
PRG4-206ENST00000635041 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
PRG4-206ENST00000635041 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
PRG4-206ENST00000635041 YTHDC1Q96MU7 727 aaKnown RBP8.05□□□□□ -1.12
PRG4-206ENST00000635041 APLP2Q06481 763 aa7.97□□□□□ -1.13
PRG4-206ENST00000635041 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
PRG4-206ENST00000635041 NACADO15069 1562 aa7.93□□□□□ -1.14
PRG4-206ENST00000635041 SCRIBQ14160 1630 aa7.9□□□□□ -1.15
PRG4-206ENST00000635041 EHMT2Q96KQ7 1210 aa7.88□□□□□ -1.15
PRG4-206ENST00000635041 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
PRG4-206ENST00000635041 TTBK1Q5TCY1 1321 aaPredicted RBP7.84□□□□□ -1.15
PRG4-206ENST00000635041 ATP1B4Q9UN42 357 aaPredicted RBP7.84□□□□□ -1.15
PRG4-206ENST00000635041 ZCCHC6Q5VYS8 1495 aaKnown RBP7.81□□□□□ -1.16
PRG4-206ENST00000635041 NEFLP07196 543 aa7.81□□□□□ -1.16
PRG4-206ENST00000635041 RANGAP1P46060 587 aaPredicted RBP7.79□□□□□ -1.16
PRG4-206ENST00000635041 FBLN2P98095 1184 aa7.78□□□□□ -1.16
PRG4-206ENST00000635041 ZEB1P37275 1124 aaPredicted RBP7.77□□□□□ -1.17
PRG4-206ENST00000635041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.76□□□□□ -1.17
PRG4-206ENST00000635041 UBTFP17480 764 aaKnown RBP7.76□□□□□ -1.17
PRG4-206ENST00000635041 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
PRG4-206ENST00000635041 MYT1LQ9UL68 1186 aa7.76□□□□□ -1.17
PRG4-206ENST00000635041 DAXXQ9UER7 740 aaPredicted RBP7.74□□□□□ -1.17
PRG4-206ENST00000635041 ERCC6Q03468 1493 aa7.72□□□□□ -1.17
PRG4-206ENST00000635041 NPM1P06748 294 aaKnown RBP eCLIP7.66□□□□□ -1.18
PRG4-206ENST00000635041 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
PRG4-206ENST00000635041 BAZ1BQ9UIG0 1483 aaKnown RBP7.62□□□□□ -1.19
PRG4-206ENST00000635041 MYO15BQ96JP2 1530 aa7.59□□□□□ -1.19
PRG4-206ENST00000635041 CECR2Q9BXF3 1484 aa7.58□□□□□ -1.2
PRG4-206ENST00000635041 CHMP7Q8WUX9 453 aaPredicted RBP7.57□□□□□ -1.2
PRG4-206ENST00000635041 RTL5Q5HYW3 569 aaPredicted RBP7.56□□□□□ -1.2
PRG4-206ENST00000635041 BAZ1AQ9NRL2 1556 aaPredicted RBP7.52□□□□□ -1.21
PRG4-206ENST00000635041 PDS5BQ9NTI5 1447 aa7.52□□□□□ -1.21
PRG4-206ENST00000635041 SMARCA2P51531 1590 aa7.52□□□□□ -1.21
PRG4-206ENST00000635041 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
PRG4-206ENST00000635041 CDK11AQ9UQ88 783 aaPredicted RBP7.47□□□□□ -1.21
PRG4-206ENST00000635041 ZNF316A6NFI3 1004 aaPredicted RBP7.47□□□□□ -1.21
PRG4-206ENST00000635041 TRHP20396 242 aaPredicted RBP7.45□□□□□ -1.22
PRG4-206ENST00000635041 CHIC1Q5VXU3 224 aa7.44□□□□□ -1.22
PRG4-206ENST00000635041 GLIPR1L2Q4G1C9 344 aa7.44□□□□□ -1.22
PRG4-206ENST00000635041 CLSPNQ9HAW4 1339 aa7.43□□□□□ -1.22
PRG4-206ENST00000635041 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
PRG4-206ENST00000635041 HRCP23327 699 aa7.39□□□□□ -1.23
PRG4-206ENST00000635041 RSF1Q96T23 1441 aaPredicted RBP7.36□□□□□ -1.23
PRG4-206ENST00000635041 P3H3Q8IVL6 736 aa7.35□□□□□ -1.23
PRG4-206ENST00000635041 ARID3CA6NKF2 412 aa7.35□□□□□ -1.23
PRG4-206ENST00000635041 CSRNP3Q8WYN3 585 aa7.35□□□□□ -1.23
PRG4-206ENST00000635041 CADPSQ9ULU8 1353 aa7.34□□□□□ -1.23
PRG4-206ENST00000635041 CEP164Q9UPV0 1460 aa7.34□□□□□ -1.23
PRG4-206ENST00000635041 EIF4G1Q04637 1599 aaKnown RBP7.34□□□□□ -1.24
PRG4-206ENST00000635041 BCANQ96GW7 911 aa7.33□□□□□ -1.24
PRG4-206ENST00000635041 ITGAEP38570 1179 aa7.33□□□□□ -1.24
PRG4-206ENST00000635041 ATAD2BQ9ULI0 1458 aa7.32□□□□□ -1.24
PRG4-206ENST00000635041 OSCARQ8IYS5 282 aa7.32□□□□□ -1.24
PRG4-206ENST00000635041 PLPPR3Q6T4P5 718 aa7.31□□□□□ -1.24
PRG4-206ENST00000635041 ZNF777Q9ULD5 760 aaPredicted RBP7.31□□□□□ -1.24
PRG4-206ENST00000635041 WRNQ14191 1432 aaPredicted RBP eCLIP7.31□□□□□ -1.24
PRG4-206ENST00000635041 FAM50AQ14320 339 aaKnown RBP7.3□□□□□ -1.24
PRG4-206ENST00000635041 KIF27Q86VH2 1401 aa7.29□□□□□ -1.24
PRG4-206ENST00000635041 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
PRG4-206ENST00000635041 CC2D2AQ9P2K1 1620 aa7.29□□□□□ -1.24
PRG4-206ENST00000635041 ARID4BQ4LE39 1312 aaPredicted RBP7.28□□□□□ -1.24
PRG4-206ENST00000635041 STAG3Q9UJ98 1225 aa7.28□□□□□ -1.24
PRG4-206ENST00000635041 SMARCA4P51532 1647 aa7.28□□□□□ -1.24
PRG4-206ENST00000635041 ANP32BQ92688 251 aaKnown RBP7.27□□□□□ -1.24
PRG4-206ENST00000635041 ZBTB47Q9UFB7 747 aaPredicted RBP7.27□□□□□ -1.24
PRG4-206ENST00000635041 AEBP2Q6ZN18 517 aaPredicted RBP7.27□□□□□ -1.25
PRG4-206ENST00000635041 PLEKHD1A6NEE1 506 aa7.27□□□□□ -1.25
PRG4-206ENST00000635041 KCNH8Q96L42 1107 aa7.26□□□□□ -1.25
PRG4-206ENST00000635041 MROH2BQ7Z745 1585 aa7.26□□□□□ -1.25
PRG4-206ENST00000635041 NCAPD3P42695 1498 aa7.26□□□□□ -1.25
PRG4-206ENST00000635041 SOGA1O94964 1423 aa7.26□□□□□ -1.25
PRG4-206ENST00000635041 TRIM52Q96A61 297 aa7.26□□□□□ -1.25
PRG4-206ENST00000635041 CARMIL2Q6F5E8 1435 aa7.25□□□□□ -1.25
PRG4-206ENST00000635041 TOP2AP11388 1531 aaKnown RBP7.24□□□□□ -1.25
PRG4-206ENST00000635041 FANCD2Q9BXW9 1451 aa7.24□□□□□ -1.25
PRG4-206ENST00000635041 NEFMP07197 916 aa7.22□□□□□ -1.25
PRG4-206ENST00000635041 CUX2O14529 1486 aa7.22□□□□□ -1.25
PRG4-206ENST00000635041 DNAJC5BQ9UF47 199 aa7.21□□□□□ -1.26
PRG4-206ENST00000635041 EEA1Q15075 1411 aa7.21□□□□□ -1.26
PRG4-206ENST00000635041 SLC4A1APQ9BWU0 796 aaKnown RBP7.2□□□□□ -1.26
PRG4-206ENST00000635041 CCDC88BA6NC98 1476 aa7.2□□□□□ -1.26
PRG4-206ENST00000635041 TSPY4P0CV99 314 aa7.2□□□□□ -1.26
PRG4-206ENST00000635041 TSPY10P0CW01 314 aa7.2□□□□□ -1.26
PRG4-206ENST00000635041 PPARGC1BQ86YN6 1023 aaKnown RBP7.2□□□□□ -1.26
PRG4-206ENST00000635041 CYB5RLQ6IPT4 315 aa7.19□□□□□ -1.26
PRG4-206ENST00000635041 TDRD9Q8NDG6 1382 aaKnown RBP7.18□□□□□ -1.26
PRG4-206ENST00000635041 MRC2Q9UBG0 1479 aa7.18□□□□□ -1.26
PRG4-206ENST00000635041 MTUS2Q5JR59 1369 aa7.17□□□□□ -1.26
PRG4-206ENST00000635041 LOC105371045A0A1W2PR82 267 aa7.16□□□□□ -1.26
PRG4-206ENST00000635041 HMGXB3Q12766 1538 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms