RNA–Protein interactions for RNA: ENST00000436262.1

LINC02238-202, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 3 BASIC

Gene LINC02238, Length 320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-202ENST00000436262 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
LINC02238-202ENST00000436262 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
LINC02238-202ENST00000436262 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
LINC02238-202ENST00000436262 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
LINC02238-202ENST00000436262 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
LINC02238-202ENST00000436262 FOXD1Q16676 465 aa17.19■□□□□ 0.34
LINC02238-202ENST00000436262 MSH5O43196 834 aa16.44■□□□□ 0.22
LINC02238-202ENST00000436262 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
LINC02238-202ENST00000436262 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
LINC02238-202ENST00000436262 ADRA2BP18089 450 aa15.21■□□□□ 0.03
LINC02238-202ENST00000436262 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
LINC02238-202ENST00000436262 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
LINC02238-202ENST00000436262 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
LINC02238-202ENST00000436262 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
LINC02238-202ENST00000436262 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
LINC02238-202ENST00000436262 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
LINC02238-202ENST00000436262 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
LINC02238-202ENST00000436262 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
LINC02238-202ENST00000436262 POTEHQ6S545 545 aa13.67□□□□□ -0.22
LINC02238-202ENST00000436262 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
LINC02238-202ENST00000436262 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
LINC02238-202ENST00000436262 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
LINC02238-202ENST00000436262 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
LINC02238-202ENST00000436262 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
LINC02238-202ENST00000436262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC02238-202ENST00000436262 DSG3P32926 999 aa12.74□□□□□ -0.37
LINC02238-202ENST00000436262 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
LINC02238-202ENST00000436262 CAPN15O75808 1086 aa12.52□□□□□ -0.41
LINC02238-202ENST00000436262 U3KPZ7 1027 aaPredicted RBP12.45□□□□□ -0.42
LINC02238-202ENST00000436262 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
LINC02238-202ENST00000436262 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
LINC02238-202ENST00000436262 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
LINC02238-202ENST00000436262 ABCB7O75027 752 aa12.15□□□□□ -0.46
LINC02238-202ENST00000436262 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
LINC02238-202ENST00000436262 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
LINC02238-202ENST00000436262 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
LINC02238-202ENST00000436262 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
LINC02238-202ENST00000436262 APLP2Q06481 763 aa11.95□□□□□ -0.5
LINC02238-202ENST00000436262 HAX1O00165 279 aa11.8□□□□□ -0.52
LINC02238-202ENST00000436262 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
LINC02238-202ENST00000436262 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
LINC02238-202ENST00000436262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
LINC02238-202ENST00000436262 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
LINC02238-202ENST00000436262 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
LINC02238-202ENST00000436262 EVX2Q03828 476 aa11.64□□□□□ -0.55
LINC02238-202ENST00000436262 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
LINC02238-202ENST00000436262 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC02238-202ENST00000436262 POLA2Q14181 598 aa11.58□□□□□ -0.56
LINC02238-202ENST00000436262 REM2Q8IYK8 340 aaPredicted RBP11.58□□□□□ -0.56
LINC02238-202ENST00000436262 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
LINC02238-202ENST00000436262 LHX8Q68G74 356 aa11.57□□□□□ -0.56
LINC02238-202ENST00000436262 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
LINC02238-202ENST00000436262 GABBR2O75899 941 aa11.31□□□□□ -0.6
LINC02238-202ENST00000436262 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
LINC02238-202ENST00000436262 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
LINC02238-202ENST00000436262 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
LINC02238-202ENST00000436262 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
LINC02238-202ENST00000436262 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
LINC02238-202ENST00000436262 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
LINC02238-202ENST00000436262 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
LINC02238-202ENST00000436262 POTEMA6NI47 508 aa10.94□□□□□ -0.66
LINC02238-202ENST00000436262 KCNA4P22459 653 aa10.92□□□□□ -0.66
LINC02238-202ENST00000436262 SPDYE1Q8NFV5 336 aaPredicted RBP10.89□□□□□ -0.67
LINC02238-202ENST00000436262 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
LINC02238-202ENST00000436262 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
LINC02238-202ENST00000436262 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
LINC02238-202ENST00000436262 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
LINC02238-202ENST00000436262 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
LINC02238-202ENST00000436262 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
LINC02238-202ENST00000436262 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
LINC02238-202ENST00000436262 CLCN6P51797 869 aa10.82□□□□□ -0.68
LINC02238-202ENST00000436262 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
LINC02238-202ENST00000436262 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
LINC02238-202ENST00000436262 CD44P16070 742 aaKnown RBP10.71□□□□□ -0.69
LINC02238-202ENST00000436262 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
LINC02238-202ENST00000436262 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
LINC02238-202ENST00000436262 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
LINC02238-202ENST00000436262 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
LINC02238-202ENST00000436262 FBLN2P98095 1184 aa10.56□□□□□ -0.72
LINC02238-202ENST00000436262 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
LINC02238-202ENST00000436262 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
LINC02238-202ENST00000436262 LCE2DQ5TA82 110 aaPredicted RBP10.53□□□□□ -0.72
LINC02238-202ENST00000436262 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
LINC02238-202ENST00000436262 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
LINC02238-202ENST00000436262 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
LINC02238-202ENST00000436262 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
LINC02238-202ENST00000436262 POTEJP0CG39 1038 aa10.39□□□□□ -0.75
LINC02238-202ENST00000436262 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
LINC02238-202ENST00000436262 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
LINC02238-202ENST00000436262 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC02238-202ENST00000436262 MAMSTRQ6ZN01 415 aa10.33□□□□□ -0.76
LINC02238-202ENST00000436262 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
LINC02238-202ENST00000436262 CDAN1Q8IWY9 1227 aa10.28□□□□□ -0.76
LINC02238-202ENST00000436262 METRNQ9UJH8 293 aa10.27□□□□□ -0.77
LINC02238-202ENST00000436262 C7P10643 843 aa10.24□□□□□ -0.77
LINC02238-202ENST00000436262 ASTLQ6HA08 431 aaPredicted RBP10.22□□□□□ -0.77
LINC02238-202ENST00000436262 SLC39A7Q92504 469 aa10.22□□□□□ -0.77
LINC02238-202ENST00000436262 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
LINC02238-202ENST00000436262 SCUBE2Q9NQ36 999 aa10.19□□□□□ -0.78
LINC02238-202ENST00000436262 ATMINO43313 823 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms