RNA–Protein interactions for RNA: ENST00000355081.3

KLHL28-201, Transcript of kelch like family member 28, humanhuman

TSL 1 (best) BASIC

Gene KLHL28, Length 2,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-201ENST00000355081 NISCHQ9Y2I1 1504 aa10.65□□□□□ -0.7
KLHL28-201ENST00000355081 AEBP2Q6ZN18 517 aaPredicted RBP9.41□□□□□ -0.9
KLHL28-201ENST00000355081 SHROOM4Q9ULL8 1493 aa9.28□□□□□ -0.92
KLHL28-201ENST00000355081 HRCP23327 699 aa9.26□□□□□ -0.93
KLHL28-201ENST00000355081 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
KLHL28-201ENST00000355081 MYO15BQ96JP2 1530 aa9.14□□□□□ -0.95
KLHL28-201ENST00000355081 CHIC1Q5VXU3 224 aa9.09□□□□□ -0.95
KLHL28-201ENST00000355081 PCGF6Q9BYE7 350 aa9.07□□□□□ -0.96
KLHL28-201ENST00000355081 ZCCHC6Q5VYS8 1495 aaKnown RBP9.07□□□□□ -0.96
KLHL28-201ENST00000355081 PPARGC1BQ86YN6 1023 aaKnown RBP9.02□□□□□ -0.97
KLHL28-201ENST00000355081 DCAF1Q9Y4B6 1507 aa8.96□□□□□ -0.98
KLHL28-201ENST00000355081 CCDC180Q9P1Z9 1646 aa8.93□□□□□ -0.98
KLHL28-201ENST00000355081 TRIM26Q12899 539 aaPredicted RBP8.83□□□□□ -1
KLHL28-201ENST00000355081 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
KLHL28-201ENST00000355081 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
KLHL28-201ENST00000355081 DCAF8L2P0C7V8 631 aa8.75□□□□□ -1.01
KLHL28-201ENST00000355081 ZEB1P37275 1124 aaPredicted RBP8.75□□□□□ -1.01
KLHL28-201ENST00000355081 SCAF1Q9H7N4 1312 aaKnown RBP8.7□□□□□ -1.02
KLHL28-201ENST00000355081 ABCC9O60706 1549 aa8.61□□□□□ -1.03
KLHL28-201ENST00000355081 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
KLHL28-201ENST00000355081 RSF1Q96T23 1441 aaPredicted RBP8.53□□□□□ -1.04
KLHL28-201ENST00000355081 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
KLHL28-201ENST00000355081 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
KLHL28-201ENST00000355081 RB1CC1Q8TDY2 1594 aa8.49□□□□□ -1.05
KLHL28-201ENST00000355081 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
KLHL28-201ENST00000355081 MYT1Q01538 1121 aa8.46□□□□□ -1.05
KLHL28-201ENST00000355081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.43□□□□□ -1.06
KLHL28-201ENST00000355081 SCRIBQ14160 1630 aa8.43□□□□□ -1.06
KLHL28-201ENST00000355081 EHMT2Q96KQ7 1210 aa8.42□□□□□ -1.06
KLHL28-201ENST00000355081 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
KLHL28-201ENST00000355081 CENPBP07199 599 aaPredicted RBP8.42□□□□□ -1.06
KLHL28-201ENST00000355081 CCER1Q8TC90 406 aaPredicted RBP8.42□□□□□ -1.06
KLHL28-201ENST00000355081 DIEXFQ68CQ4 756 aaKnown RBP8.41□□□□□ -1.06
KLHL28-201ENST00000355081 WRNQ14191 1432 aaPredicted RBP eCLIP8.3□□□□□ -1.08
KLHL28-201ENST00000355081 CECR2Q9BXF3 1484 aa8.3□□□□□ -1.08
KLHL28-201ENST00000355081 MROH2BQ7Z745 1585 aa8.3□□□□□ -1.08
KLHL28-201ENST00000355081 EIF4G1Q04637 1599 aaKnown RBP8.28□□□□□ -1.08
KLHL28-201ENST00000355081 WIZO95785 1651 aa8.27□□□□□ -1.09
KLHL28-201ENST00000355081 ZNF316A6NFI3 1004 aaPredicted RBP8.27□□□□□ -1.09
KLHL28-201ENST00000355081 BAZ1AQ9NRL2 1556 aaPredicted RBP8.24□□□□□ -1.09
KLHL28-201ENST00000355081 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
KLHL28-201ENST00000355081 TTBK1Q5TCY1 1321 aaPredicted RBP8.23□□□□□ -1.09
KLHL28-201ENST00000355081 YTHDC1Q96MU7 727 aaKnown RBP8.22□□□□□ -1.09
KLHL28-201ENST00000355081 TNIKQ9UKE5 1360 aa8.2□□□□□ -1.1
KLHL28-201ENST00000355081 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
KLHL28-201ENST00000355081 NACADO15069 1562 aa8.19□□□□□ -1.1
KLHL28-201ENST00000355081 MIER1Q8N108 512 aa8.19□□□□□ -1.1
KLHL28-201ENST00000355081 ABCC8Q09428 1581 aa8.19□□□□□ -1.1
KLHL28-201ENST00000355081 SOGA1O94964 1423 aa8.16□□□□□ -1.1
KLHL28-201ENST00000355081 EEA1Q15075 1411 aa8.15□□□□□ -1.11
KLHL28-201ENST00000355081 TOP2AP11388 1531 aaKnown RBP8.14□□□□□ -1.11
KLHL28-201ENST00000355081 CSRNP3Q8WYN3 585 aa8.12□□□□□ -1.11
KLHL28-201ENST00000355081 UBTFP17480 764 aaKnown RBP8.11□□□□□ -1.11
KLHL28-201ENST00000355081 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
KLHL28-201ENST00000355081 RUSC2Q8N2Y8 1516 aa8.11□□□□□ -1.11
KLHL28-201ENST00000355081 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
KLHL28-201ENST00000355081 HNRNPUL2Q1KMD3 747 aaKnown RBP8.09□□□□□ -1.11
KLHL28-201ENST00000355081 CLSPNQ9HAW4 1339 aa8.09□□□□□ -1.11
KLHL28-201ENST00000355081 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
KLHL28-201ENST00000355081 SUPT16HQ9Y5B9 1047 aaKnown RBP8.05□□□□□ -1.12
KLHL28-201ENST00000355081 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
KLHL28-201ENST00000355081 KIF21BO75037 1637 aa8.04□□□□□ -1.12
KLHL28-201ENST00000355081 VPS8Q8N3P4 1428 aa8.03□□□□□ -1.12
KLHL28-201ENST00000355081 CLIP1P30622 1438 aa8.02□□□□□ -1.12
KLHL28-201ENST00000355081 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
KLHL28-201ENST00000355081 BAZ1BQ9UIG0 1483 aaKnown RBP7.99□□□□□ -1.13
KLHL28-201ENST00000355081 DHX57Q6P158 1386 aaKnown RBP7.99□□□□□ -1.13
KLHL28-201ENST00000355081 ANP32EQ9BTT0 268 aa7.98□□□□□ -1.13
KLHL28-201ENST00000355081 SENP3Q9H4L4 574 aaPredicted RBP7.98□□□□□ -1.13
KLHL28-201ENST00000355081 APLP2Q06481 763 aa7.98□□□□□ -1.13
KLHL28-201ENST00000355081 SYNJ1O43426 1573 aa7.97□□□□□ -1.13
KLHL28-201ENST00000355081 RAPGEF2Q9Y4G8 1499 aa7.95□□□□□ -1.14
KLHL28-201ENST00000355081 POTEDQ86YR6 584 aa7.93□□□□□ -1.14
KLHL28-201ENST00000355081 UNC13AQ9UPW8 1703 aa7.92□□□□□ -1.14
KLHL28-201ENST00000355081 PHF23Q9BUL5 403 aaPredicted RBP7.9□□□□□ -1.14
KLHL28-201ENST00000355081 BCL11AQ9H165 835 aa7.9□□□□□ -1.15
KLHL28-201ENST00000355081 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
KLHL28-201ENST00000355081 CUX2O14529 1486 aa7.89□□□□□ -1.15
KLHL28-201ENST00000355081 RANGAP1P46060 587 aaPredicted RBP7.88□□□□□ -1.15
KLHL28-201ENST00000355081 RRBP1Q9P2E9 1410 aaKnown RBP7.88□□□□□ -1.15
KLHL28-201ENST00000355081 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
KLHL28-201ENST00000355081 KCNH8Q96L42 1107 aa7.87□□□□□ -1.15
KLHL28-201ENST00000355081 KANK4Q5T7N3 995 aaPredicted RBP7.87□□□□□ -1.15
KLHL28-201ENST00000355081 ERICH3Q5RHP9 1530 aa7.86□□□□□ -1.15
KLHL28-201ENST00000355081 BCANQ96GW7 911 aa7.85□□□□□ -1.15
KLHL28-201ENST00000355081 TOP2BQ02880 1626 aa7.84□□□□□ -1.15
KLHL28-201ENST00000355081 FKBP8Q14318 412 aa7.84□□□□□ -1.15
KLHL28-201ENST00000355081 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
KLHL28-201ENST00000355081 CCNB3Q8WWL7 1395 aa7.83□□□□□ -1.16
KLHL28-201ENST00000355081 MAPKBP1O60336 1514 aa7.82□□□□□ -1.16
KLHL28-201ENST00000355081 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
KLHL28-201ENST00000355081 BIVM-ERCC5R4GMW8 1640 aa7.81□□□□□ -1.16
KLHL28-201ENST00000355081 RAB3GAP2Q9H2M9 1393 aa7.8□□□□□ -1.16
KLHL28-201ENST00000355081 BICRAQ9NZM4 1560 aa7.8□□□□□ -1.16
KLHL28-201ENST00000355081 ATAD2BQ9ULI0 1458 aa7.79□□□□□ -1.16
KLHL28-201ENST00000355081 NEFLP07196 543 aa7.78□□□□□ -1.16
KLHL28-201ENST00000355081 DDX10Q13206 875 aaKnown RBP7.78□□□□□ -1.16
KLHL28-201ENST00000355081 WDR97A6NE52 1622 aa7.78□□□□□ -1.16
KLHL28-201ENST00000355081 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
KLHL28-201ENST00000355081 ITGAEP38570 1179 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms