RNA–Protein interactions for RNA: ENST00000380138.3

EDIL3-202, Transcript of EGF like repeats and discoidin domains 3, humanhuman

TSL 1 (best) BASIC

Gene EDIL3, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDIL3-202ENST00000380138 NISCHQ9Y2I1 1504 aa11.68□□□□□ -0.54
EDIL3-202ENST00000380138 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.76
EDIL3-202ENST00000380138 ABCC9O60706 1549 aa10.26□□□□□ -0.77
EDIL3-202ENST00000380138 CCDC180Q9P1Z9 1646 aa10.25□□□□□ -0.77
EDIL3-202ENST00000380138 RB1CC1Q8TDY2 1594 aa9.78□□□□□ -0.84
EDIL3-202ENST00000380138 NACADO15069 1562 aa9.74□□□□□ -0.85
EDIL3-202ENST00000380138 ZCCHC6Q5VYS8 1495 aaKnown RBP9.7□□□□□ -0.86
EDIL3-202ENST00000380138 PABPN1Q86U42 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
EDIL3-202ENST00000380138 MYO15BQ96JP2 1530 aa9.59□□□□□ -0.87
EDIL3-202ENST00000380138 DCAF1Q9Y4B6 1507 aa9.57□□□□□ -0.88
EDIL3-202ENST00000380138 SHROOM4Q9ULL8 1493 aa9.57□□□□□ -0.88
EDIL3-202ENST00000380138 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
EDIL3-202ENST00000380138 BICRAQ9NZM4 1560 aa9.29□□□□□ -0.92
EDIL3-202ENST00000380138 UNC13AQ9UPW8 1703 aa9.29□□□□□ -0.92
EDIL3-202ENST00000380138 DNAJC5BQ9UF47 199 aa9.26□□□□□ -0.93
EDIL3-202ENST00000380138 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
EDIL3-202ENST00000380138 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
EDIL3-202ENST00000380138 SUPT5HO00267 1087 aaKnown RBP9.14□□□□□ -0.95
EDIL3-202ENST00000380138 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
EDIL3-202ENST00000380138 BAZ1AQ9NRL2 1556 aaPredicted RBP9.1□□□□□ -0.95
EDIL3-202ENST00000380138 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
EDIL3-202ENST00000380138 SMARCA2P51531 1590 aa9.05□□□□□ -0.96
EDIL3-202ENST00000380138 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
EDIL3-202ENST00000380138 SMARCA4P51532 1647 aa9.02□□□□□ -0.97
EDIL3-202ENST00000380138 MROH2BQ7Z745 1585 aa9□□□□□ -0.97
EDIL3-202ENST00000380138 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
EDIL3-202ENST00000380138 RSF1Q96T23 1441 aaPredicted RBP8.96□□□□□ -0.97
EDIL3-202ENST00000380138 ERCC6Q03468 1493 aa8.95□□□□□ -0.98
EDIL3-202ENST00000380138 HMGXB3Q12766 1538 aa8.91□□□□□ -0.98
EDIL3-202ENST00000380138 WIZO95785 1651 aa8.88□□□□□ -0.99
EDIL3-202ENST00000380138 PDS5BQ9NTI5 1447 aa8.86□□□□□ -0.99
EDIL3-202ENST00000380138 CADPSQ9ULU8 1353 aa8.84□□□□□ -0.99
EDIL3-202ENST00000380138 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
EDIL3-202ENST00000380138 TOP2AP11388 1531 aaKnown RBP8.82□□□□□ -1
EDIL3-202ENST00000380138 NESP48681 1621 aa8.79□□□□□ -1
EDIL3-202ENST00000380138 AEBP2Q6ZN18 517 aaPredicted RBP8.76□□□□□ -1.01
EDIL3-202ENST00000380138 CCDC88BA6NC98 1476 aa8.75□□□□□ -1.01
EDIL3-202ENST00000380138 LAMC3Q9Y6N6 1575 aa8.75□□□□□ -1.01
EDIL3-202ENST00000380138 CEP164Q9UPV0 1460 aa8.74□□□□□ -1.01
EDIL3-202ENST00000380138 FANCD2Q9BXW9 1451 aa8.72□□□□□ -1.01
EDIL3-202ENST00000380138 CFTRP13569 1480 aa8.7□□□□□ -1.02
EDIL3-202ENST00000380138 MRC2Q9UBG0 1479 aa8.66□□□□□ -1.02
EDIL3-202ENST00000380138 FBLN2P98095 1184 aa8.65□□□□□ -1.02
EDIL3-202ENST00000380138 CUX2O14529 1486 aa8.64□□□□□ -1.03
EDIL3-202ENST00000380138 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
EDIL3-202ENST00000380138 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
EDIL3-202ENST00000380138 KIF21AQ7Z4S6 1674 aa8.57□□□□□ -1.04
EDIL3-202ENST00000380138 WRNQ14191 1432 aaPredicted RBP eCLIP8.56□□□□□ -1.04
EDIL3-202ENST00000380138 CHMP7Q8WUX9 453 aaPredicted RBP8.55□□□□□ -1.04
EDIL3-202ENST00000380138 SOGA1O94964 1423 aa8.55□□□□□ -1.04
EDIL3-202ENST00000380138 TOPBP1Q92547 1522 aa8.53□□□□□ -1.04
EDIL3-202ENST00000380138 URB2Q14146 1524 aaKnown RBP8.53□□□□□ -1.04
EDIL3-202ENST00000380138 TDRD9Q8NDG6 1382 aaKnown RBP8.52□□□□□ -1.05
EDIL3-202ENST00000380138 IFT140Q96RY7 1462 aa8.52□□□□□ -1.05
EDIL3-202ENST00000380138 OSCARQ8IYS5 282 aa8.51□□□□□ -1.05
EDIL3-202ENST00000380138 WDR62O43379 1518 aa8.51□□□□□ -1.05
EDIL3-202ENST00000380138 DNMBPQ6XZF7 1577 aa8.5□□□□□ -1.05
EDIL3-202ENST00000380138 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
EDIL3-202ENST00000380138 THOC2Q8NI27 1593 aaKnown RBP8.49□□□□□ -1.05
EDIL3-202ENST00000380138 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
EDIL3-202ENST00000380138 POLA1P09884 1462 aaPredicted RBP8.47□□□□□ -1.05
EDIL3-202ENST00000380138 RAD54L2Q9Y4B4 1467 aa8.47□□□□□ -1.05
EDIL3-202ENST00000380138 AQRO60306 1485 aaKnown RBP eCLIP8.46□□□□□ -1.05
EDIL3-202ENST00000380138 PRDM2Q13029 1718 aa8.45□□□□□ -1.06
EDIL3-202ENST00000380138 EHMT2Q96KQ7 1210 aa8.45□□□□□ -1.06
EDIL3-202ENST00000380138 CUX1P39880 1505 aa8.43□□□□□ -1.06
EDIL3-202ENST00000380138 KIF27Q86VH2 1401 aa8.42□□□□□ -1.06
EDIL3-202ENST00000380138 DNAJC5Q9H3Z4 198 aa8.42□□□□□ -1.06
EDIL3-202ENST00000380138 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
EDIL3-202ENST00000380138 TTBK1Q5TCY1 1321 aaPredicted RBP8.42□□□□□ -1.06
EDIL3-202ENST00000380138 GAPVD1Q14C86 1478 aa8.42□□□□□ -1.06
EDIL3-202ENST00000380138 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
EDIL3-202ENST00000380138 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
EDIL3-202ENST00000380138 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
EDIL3-202ENST00000380138 CHIC1Q5VXU3 224 aa8.38□□□□□ -1.07
EDIL3-202ENST00000380138 TOP2BQ02880 1626 aa8.36□□□□□ -1.07
EDIL3-202ENST00000380138 SNAPC4Q5SXM2 1469 aa8.36□□□□□ -1.07
EDIL3-202ENST00000380138 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
EDIL3-202ENST00000380138 ABCA10Q8WWZ4 1543 aa8.35□□□□□ -1.07
EDIL3-202ENST00000380138 CSRNP3Q8WYN3 585 aa8.34□□□□□ -1.07
EDIL3-202ENST00000380138 CYB5RLQ6IPT4 315 aa8.34□□□□□ -1.07
EDIL3-202ENST00000380138 CARMIL1Q5VZK9 1371 aa8.33□□□□□ -1.08
EDIL3-202ENST00000380138 EIF4G3O43432 1585 aaKnown RBP8.33□□□□□ -1.08
EDIL3-202ENST00000380138 MAGI1Q96QZ7 1491 aaPredicted RBP8.33□□□□□ -1.08
EDIL3-202ENST00000380138 NPM1P06748 294 aaKnown RBP eCLIP8.33□□□□□ -1.08
EDIL3-202ENST00000380138 FHAD1B1AJZ9 1412 aa8.32□□□□□ -1.08
EDIL3-202ENST00000380138 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
EDIL3-202ENST00000380138 TARBP1Q13395 1621 aaKnown RBP8.3□□□□□ -1.08
EDIL3-202ENST00000380138 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
EDIL3-202ENST00000380138 TRHP20396 242 aaPredicted RBP8.29□□□□□ -1.08
EDIL3-202ENST00000380138 JPH4Q96JJ6 628 aa8.29□□□□□ -1.08
EDIL3-202ENST00000380138 ATP1B4Q9UN42 357 aaPredicted RBP8.29□□□□□ -1.08
EDIL3-202ENST00000380138 IGF1RP08069 1367 aa8.28□□□□□ -1.08
EDIL3-202ENST00000380138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.27□□□□□ -1.08
EDIL3-202ENST00000380138 HNRNPUL2Q1KMD3 747 aaKnown RBP8.27□□□□□ -1.08
EDIL3-202ENST00000380138 WDR97A6NE52 1622 aa8.27□□□□□ -1.09
EDIL3-202ENST00000380138 EEA1Q15075 1411 aa8.27□□□□□ -1.09
EDIL3-202ENST00000380138 ERICH3Q5RHP9 1530 aa8.26□□□□□ -1.09
EDIL3-202ENST00000380138 GRIN2AQ12879 1464 aa8.25□□□□□ -1.09
EDIL3-202ENST00000380138 P3H3Q8IVL6 736 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms