Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 AC138969.2-201ENST00000532739 9932 ntBASIC13.34□□□□□ -0.27
VPS25Q9BRG1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VPS25Q9BRG1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.33□□□□□ -0.27
VPS25Q9BRG1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VPS25Q9BRG1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
VPS25Q9BRG1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 DUX4L11-201ENST00000611504 1267 ntBASIC13.33□□□□□ -0.28
VPS25Q9BRG1 DUX4L12-201ENST00000614593 1267 ntBASIC13.33□□□□□ -0.28
VPS25Q9BRG1 DUX4L14-201ENST00000621227 1267 ntBASIC13.33□□□□□ -0.28
VPS25Q9BRG1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 PCDHB17P-201ENST00000539533 2393 ntBASIC13.33□□□□□ -0.28
VPS25Q9BRG1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
VPS25Q9BRG1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms