RNA–Protein interactions for RNA: ENST00000595515.5

PRKD2-206, Transcript of protein kinase D2, humanhuman

TSL 2 BASIC

Gene PRKD2, Length 3,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-206ENST00000595515 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
PRKD2-206ENST00000595515 PELP1Q8IZL8 1130 aaKnown RBP25.96■■□□□ 1.75
PRKD2-206ENST00000595515 MYT1Q01538 1121 aa25.62■■□□□ 1.69
PRKD2-206ENST00000595515 HRCP23327 699 aa25.34■■□□□ 1.65
PRKD2-206ENST00000595515 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
PRKD2-206ENST00000595515 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.55
PRKD2-206ENST00000595515 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
PRKD2-206ENST00000595515 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
PRKD2-206ENST00000595515 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
PRKD2-206ENST00000595515 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
PRKD2-206ENST00000595515 PPARGC1BQ86YN6 1023 aaKnown RBP24.51■■□□□ 1.51
PRKD2-206ENST00000595515 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
PRKD2-206ENST00000595515 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
PRKD2-206ENST00000595515 PRKCSHP14314 528 aaPredicted RBP24.21■■□□□ 1.47
PRKD2-206ENST00000595515 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
PRKD2-206ENST00000595515 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
PRKD2-206ENST00000595515 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
PRKD2-206ENST00000595515 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
PRKD2-206ENST00000595515 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
PRKD2-206ENST00000595515 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
PRKD2-206ENST00000595515 SLC24A1O60721 1099 aa23.68■■□□□ 1.38
PRKD2-206ENST00000595515 APLP2Q06481 763 aa23.64■■□□□ 1.37
PRKD2-206ENST00000595515 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
PRKD2-206ENST00000595515 ACIN1Q9UKV3 1341 aaKnown RBP23.37■■□□□ 1.33
PRKD2-206ENST00000595515 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
PRKD2-206ENST00000595515 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
PRKD2-206ENST00000595515 ABCC9O60706 1549 aa23.16■■□□□ 1.3
PRKD2-206ENST00000595515 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
PRKD2-206ENST00000595515 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
PRKD2-206ENST00000595515 GTF3C3Q9Y5Q9 886 aa23.05■■□□□ 1.28
PRKD2-206ENST00000595515 TRIM41Q8WV44 630 aa23■■□□□ 1.27
PRKD2-206ENST00000595515 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
PRKD2-206ENST00000595515 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
PRKD2-206ENST00000595515 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
PRKD2-206ENST00000595515 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
PRKD2-206ENST00000595515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
PRKD2-206ENST00000595515 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
PRKD2-206ENST00000595515 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
PRKD2-206ENST00000595515 ZNF316A6NFI3 1004 aaPredicted RBP22.55■■□□□ 1.2
PRKD2-206ENST00000595515 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
PRKD2-206ENST00000595515 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
PRKD2-206ENST00000595515 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
PRKD2-206ENST00000595515 CLSPNQ9HAW4 1339 aa22.33■■□□□ 1.16
PRKD2-206ENST00000595515 EIF5BO60841 1220 aaKnown RBP22.31■■□□□ 1.16
PRKD2-206ENST00000595515 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
PRKD2-206ENST00000595515 MIER1Q8N108 512 aa22.27■■□□□ 1.16
PRKD2-206ENST00000595515 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
PRKD2-206ENST00000595515 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
PRKD2-206ENST00000595515 ANP32EQ9BTT0 268 aa22.2■■□□□ 1.14
PRKD2-206ENST00000595515 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
PRKD2-206ENST00000595515 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
PRKD2-206ENST00000595515 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
PRKD2-206ENST00000595515 WIZO95785 1651 aa22.14■■□□□ 1.13
PRKD2-206ENST00000595515 EEA1Q15075 1411 aa22.05■■□□□ 1.12
PRKD2-206ENST00000595515 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
PRKD2-206ENST00000595515 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
PRKD2-206ENST00000595515 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
PRKD2-206ENST00000595515 TSHZ2Q9NRE2 1034 aa21.93■■□□□ 1.1
PRKD2-206ENST00000595515 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
PRKD2-206ENST00000595515 NACADO15069 1562 aa21.91■■□□□ 1.1
PRKD2-206ENST00000595515 GOLGA3Q08378 1498 aa21.89■■□□□ 1.09
PRKD2-206ENST00000595515 SOGA1O94964 1423 aa21.87■■□□□ 1.09
PRKD2-206ENST00000595515 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
PRKD2-206ENST00000595515 PLEKHG5O94827 1062 aa21.83■■□□□ 1.08
PRKD2-206ENST00000595515 UBE2Q2Q8WVN8 375 aa21.82■■□□□ 1.08
PRKD2-206ENST00000595515 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
PRKD2-206ENST00000595515 ANO8Q9HCE9 1232 aaPredicted RBP21.78■■□□□ 1.08
PRKD2-206ENST00000595515 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
PRKD2-206ENST00000595515 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
PRKD2-206ENST00000595515 KIF21BO75037 1637 aa21.71■■□□□ 1.07
PRKD2-206ENST00000595515 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
PRKD2-206ENST00000595515 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
PRKD2-206ENST00000595515 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
PRKD2-206ENST00000595515 CLIP1P30622 1438 aa21.63■■□□□ 1.05
PRKD2-206ENST00000595515 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
PRKD2-206ENST00000595515 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
PRKD2-206ENST00000595515 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
PRKD2-206ENST00000595515 PODXL2Q9NZ53 605 aa21.5■■□□□ 1.03
PRKD2-206ENST00000595515 CUX2O14529 1486 aa21.44■■□□□ 1.02
PRKD2-206ENST00000595515 RBM19Q9Y4C8 960 aaKnown RBP21.4■■□□□ 1.02
PRKD2-206ENST00000595515 FKBP8Q14318 412 aa21.37■■□□□ 1.01
PRKD2-206ENST00000595515 PKNOX2Q96KN3 472 aa21.36■■□□□ 1.01
PRKD2-206ENST00000595515 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
PRKD2-206ENST00000595515 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
PRKD2-206ENST00000595515 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
PRKD2-206ENST00000595515 BCANQ96GW7 911 aa21.32■■□□□ 1
PRKD2-206ENST00000595515 NEFLP07196 543 aa21.29■■□□□ 1
PRKD2-206ENST00000595515 KCNH8Q96L42 1107 aa21.28■■□□□ 1
PRKD2-206ENST00000595515 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
PRKD2-206ENST00000595515 FANCIQ9NVI1 1328 aa21.21■□□□□ 0.99
PRKD2-206ENST00000595515 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
PRKD2-206ENST00000595515 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
PRKD2-206ENST00000595515 MSH5O43196 834 aa21.18■□□□□ 0.98
PRKD2-206ENST00000595515 MAPKBP1O60336 1514 aa21.17■□□□□ 0.98
PRKD2-206ENST00000595515 CCER2I3L3R5 266 aa21.17■□□□□ 0.98
PRKD2-206ENST00000595515 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
PRKD2-206ENST00000595515 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
PRKD2-206ENST00000595515 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
PRKD2-206ENST00000595515 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.97
PRKD2-206ENST00000595515 KANK4Q5T7N3 995 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms