RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 MYT1Q01538 1121 aa23.43■■□□□ 1.34
CCBE1-201ENST00000398179 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
CCBE1-201ENST00000398179 TTBK1Q5TCY1 1321 aaPredicted RBP21.84■■□□□ 1.09
CCBE1-201ENST00000398179 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
CCBE1-201ENST00000398179 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
CCBE1-201ENST00000398179 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
CCBE1-201ENST00000398179 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
CCBE1-201ENST00000398179 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
CCBE1-201ENST00000398179 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
CCBE1-201ENST00000398179 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
CCBE1-201ENST00000398179 GLIPR1L2Q4G1C9 344 aa19.8■□□□□ 0.76
CCBE1-201ENST00000398179 EIF5BO60841 1220 aaKnown RBP19.62■□□□□ 0.73
CCBE1-201ENST00000398179 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
CCBE1-201ENST00000398179 DAXXQ9UER7 740 aaPredicted RBP19.47■□□□□ 0.71
CCBE1-201ENST00000398179 POLR3GLQ9BT43 218 aa19.24■□□□□ 0.67
CCBE1-201ENST00000398179 NEFLP07196 543 aa19.2■□□□□ 0.66
CCBE1-201ENST00000398179 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
CCBE1-201ENST00000398179 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
CCBE1-201ENST00000398179 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
CCBE1-201ENST00000398179 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
CCBE1-201ENST00000398179 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
CCBE1-201ENST00000398179 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
CCBE1-201ENST00000398179 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
CCBE1-201ENST00000398179 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
CCBE1-201ENST00000398179 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
CCBE1-201ENST00000398179 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
CCBE1-201ENST00000398179 NISCHQ9Y2I1 1504 aa18.67■□□□□ 0.58
CCBE1-201ENST00000398179 HOMEZQ8IX15 550 aa18.65■□□□□ 0.58
CCBE1-201ENST00000398179 PODXL2Q9NZ53 605 aa18.59■□□□□ 0.57
CCBE1-201ENST00000398179 CDK11BP21127 795 aaKnown RBP18.5■□□□□ 0.55
CCBE1-201ENST00000398179 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
CCBE1-201ENST00000398179 AMER1Q5JTC6 1135 aaPredicted RBP18.48■□□□□ 0.55
CCBE1-201ENST00000398179 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
CCBE1-201ENST00000398179 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
CCBE1-201ENST00000398179 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
CCBE1-201ENST00000398179 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
CCBE1-201ENST00000398179 C14orf37Q86TY3 774 aa18.32■□□□□ 0.52
CCBE1-201ENST00000398179 ARXQ96QS3 562 aa18.32■□□□□ 0.52
CCBE1-201ENST00000398179 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
CCBE1-201ENST00000398179 APLP2Q06481 763 aa18.3■□□□□ 0.52
CCBE1-201ENST00000398179 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
CCBE1-201ENST00000398179 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
CCBE1-201ENST00000398179 NPM2Q86SE8 214 aaKnown RBP18.22■□□□□ 0.51
CCBE1-201ENST00000398179 PTMSP20962 102 aa18.21■□□□□ 0.51
CCBE1-201ENST00000398179 HRCP23327 699 aa18.2■□□□□ 0.5
CCBE1-201ENST00000398179 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
CCBE1-201ENST00000398179 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
CCBE1-201ENST00000398179 TRIM44Q96DX7 344 aaPredicted RBP18.08■□□□□ 0.48
CCBE1-201ENST00000398179 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
CCBE1-201ENST00000398179 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
CCBE1-201ENST00000398179 BCANQ96GW7 911 aa17.97■□□□□ 0.47
CCBE1-201ENST00000398179 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
CCBE1-201ENST00000398179 TPRNQ4KMQ1 711 aa17.91■□□□□ 0.46
CCBE1-201ENST00000398179 PDE4CQ08493 712 aa17.9■□□□□ 0.46
CCBE1-201ENST00000398179 A0A0U1RQG5 324 aaPredicted RBP17.86■□□□□ 0.45
CCBE1-201ENST00000398179 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
CCBE1-201ENST00000398179 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
CCBE1-201ENST00000398179 CALRP27797 417 aaKnown RBP17.83■□□□□ 0.44
CCBE1-201ENST00000398179 NAP1L5Q96NT1 182 aaPredicted RBP17.82■□□□□ 0.44
CCBE1-201ENST00000398179 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
CCBE1-201ENST00000398179 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
CCBE1-201ENST00000398179 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.43
CCBE1-201ENST00000398179 APPP05067 770 aa17.72■□□□□ 0.43
CCBE1-201ENST00000398179 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
CCBE1-201ENST00000398179 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
CCBE1-201ENST00000398179 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
CCBE1-201ENST00000398179 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
CCBE1-201ENST00000398179 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
CCBE1-201ENST00000398179 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
CCBE1-201ENST00000398179 ANP32AP39687 249 aaKnown RBP17.59■□□□□ 0.41
CCBE1-201ENST00000398179 TAF7LQ5H9L4 462 aa17.59■□□□□ 0.41
CCBE1-201ENST00000398179 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
CCBE1-201ENST00000398179 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
CCBE1-201ENST00000398179 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
CCBE1-201ENST00000398179 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
CCBE1-201ENST00000398179 ARID3AQ99856 593 aa17.48■□□□□ 0.39
CCBE1-201ENST00000398179 HSP90AA1P07900 732 aaKnown RBP17.48■□□□□ 0.39
CCBE1-201ENST00000398179 ZNF526Q8TF50 670 aaPredicted RBP17.46■□□□□ 0.39
CCBE1-201ENST00000398179 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
CCBE1-201ENST00000398179 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
CCBE1-201ENST00000398179 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
CCBE1-201ENST00000398179 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
CCBE1-201ENST00000398179 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
CCBE1-201ENST00000398179 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
CCBE1-201ENST00000398179 DEKP35659 375 aaKnown RBP17.36■□□□□ 0.37
CCBE1-201ENST00000398179 TNNT3P45378 269 aaPredicted RBP17.36■□□□□ 0.37
CCBE1-201ENST00000398179 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
CCBE1-201ENST00000398179 BRD2P25440 801 aaKnown RBP17.34■□□□□ 0.37
CCBE1-201ENST00000398179 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
CCBE1-201ENST00000398179 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
CCBE1-201ENST00000398179 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
CCBE1-201ENST00000398179 ZBTB7CA1YPR0 619 aa17.3■□□□□ 0.36
CCBE1-201ENST00000398179 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
CCBE1-201ENST00000398179 NBR1Q14596 966 aa17.3■□□□□ 0.36
CCBE1-201ENST00000398179 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
CCBE1-201ENST00000398179 CCDC136Q96JN2 1154 aa17.27■□□□□ 0.36
CCBE1-201ENST00000398179 HSP90AA2PQ14568 343 aaPredicted RBP17.24■□□□□ 0.35
CCBE1-201ENST00000398179 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
CCBE1-201ENST00000398179 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
CCBE1-201ENST00000398179 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms