Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
EXT1Q16394 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EXT1Q16394 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 PCDHAC2-203ENST00000615316 3011 ntBASIC17.63■□□□□ 0.41
EXT1Q16394 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.63■□□□□ 0.41
EXT1Q16394 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 AC104076.2-201ENST00000448912 469 ntBASIC17.63■□□□□ 0.41
EXT1Q16394 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 LINC01238-205ENST00000567549 1107 ntBASIC17.63■□□□□ 0.41
EXT1Q16394 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.63■□□□□ 0.41
EXT1Q16394 AC141257.4-201ENST00000634557 245 ntBASIC17.63■□□□□ 0.41
EXT1Q16394 AC136944.6-201ENST00000634818 245 ntBASIC17.63■□□□□ 0.41
EXT1Q16394 AL031432.5-201ENST00000641059 760 ntBASIC17.63■□□□□ 0.41
EXT1Q16394 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXT1Q16394 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.63■□□□□ 0.41
EXT1Q16394 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.63■□□□□ 0.41
EXT1Q16394 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.63■□□□□ 0.41
EXT1Q16394 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.63■□□□□ 0.41
EXT1Q16394 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.63■□□□□ 0.41
EXT1Q16394 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
EXT1Q16394 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
EXT1Q16394 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.62■□□□□ 0.41
EXT1Q16394 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
EXT1Q16394 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EXT1Q16394 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 AP000523.1-201ENST00000398242 1049 ntBASIC17.62■□□□□ 0.41
EXT1Q16394 AK4P3-201ENST00000418260 669 ntBASIC17.62■□□□□ 0.41
EXT1Q16394 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.62■□□□□ 0.41
EXT1Q16394 COX11P1-201ENST00000489116 835 ntBASIC17.62■□□□□ 0.41
EXT1Q16394 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.62■□□□□ 0.41
EXT1Q16394 AC006011.2-201ENST00000621313 1158 ntBASIC17.62■□□□□ 0.41
EXT1Q16394 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.62■□□□□ 0.41
EXT1Q16394 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EXT1Q16394 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.62■□□□□ 0.41
EXT1Q16394 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.62■□□□□ 0.41
EXT1Q16394 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.62■□□□□ 0.41
EXT1Q16394 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXT1Q16394 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.61■□□□□ 0.41
EXT1Q16394 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
EXT1Q16394 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
EXT1Q16394 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.61■□□□□ 0.41
EXT1Q16394 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
EXT1Q16394 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EXT1Q16394 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.61■□□□□ 0.41
EXT1Q16394 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.61■□□□□ 0.41
EXT1Q16394 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.61■□□□□ 0.41
EXT1Q16394 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.61■□□□□ 0.41
EXT1Q16394 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
EXT1Q16394 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.61■□□□□ 0.41
EXT1Q16394 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.61■□□□□ 0.41
EXT1Q16394 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
EXT1Q16394 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXT1Q16394 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXT1Q16394 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXT1Q16394 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EXT1Q16394 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.6■□□□□ 0.41
EXT1Q16394 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXT1Q16394 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXT1Q16394 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXT1Q16394 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms