RNA–Protein interactions for RNA: ENST00000322912.9

RTBDN-201, Transcript of retbindin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RTBDN, Length 1,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDN-201ENST00000322912 NISCHQ9Y2I1 1504 aa46.44■■■■■ 5.02
RTBDN-201ENST00000322912 CCDC180Q9P1Z9 1646 aa41.37■■■■■ 4.21
RTBDN-201ENST00000322912 ABCC9O60706 1549 aa41.1■■■■■ 4.17
RTBDN-201ENST00000322912 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
RTBDN-201ENST00000322912 DCAF8L2P0C7V8 631 aa39.11■■■■□ 3.85
RTBDN-201ENST00000322912 NACADO15069 1562 aa39.04■■■■□ 3.84
RTBDN-201ENST00000322912 MYO15BQ96JP2 1530 aa38.62■■■■□ 3.77
RTBDN-201ENST00000322912 ZCCHC6Q5VYS8 1495 aaKnown RBP38.58■■■■□ 3.77
RTBDN-201ENST00000322912 PABPN1Q86U42 306 aaKnown RBP eCLIP38.39■■■■□ 3.74
RTBDN-201ENST00000322912 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
RTBDN-201ENST00000322912 DCAF1Q9Y4B6 1507 aa38.31■■■■□ 3.72
RTBDN-201ENST00000322912 DNAJC5BQ9UF47 199 aa38.24■■■■□ 3.71
RTBDN-201ENST00000322912 BICRAQ9NZM4 1560 aa38.12■■■■□ 3.69
RTBDN-201ENST00000322912 SCRIBQ14160 1630 aa37.86■■■■□ 3.65
RTBDN-201ENST00000322912 SHROOM4Q9ULL8 1493 aa37.51■■■■□ 3.6
RTBDN-201ENST00000322912 EIF4G1Q04637 1599 aaKnown RBP37.12■■■■□ 3.53
RTBDN-201ENST00000322912 CC2D2AQ9P2K1 1620 aa37.1■■■■□ 3.53
RTBDN-201ENST00000322912 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
RTBDN-201ENST00000322912 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
RTBDN-201ENST00000322912 NCAPD3P42695 1498 aa36.08■■■■□ 3.37
RTBDN-201ENST00000322912 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.36
RTBDN-201ENST00000322912 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
RTBDN-201ENST00000322912 SMARCA2P51531 1590 aa35.92■■■■□ 3.34
RTBDN-201ENST00000322912 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
RTBDN-201ENST00000322912 HMGXB3Q12766 1538 aa35.82■■■■□ 3.32
RTBDN-201ENST00000322912 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
RTBDN-201ENST00000322912 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
RTBDN-201ENST00000322912 NESP48681 1621 aa35.46■■■■□ 3.27
RTBDN-201ENST00000322912 WIZO95785 1651 aa35.41■■■■□ 3.26
RTBDN-201ENST00000322912 ERCC6Q03468 1493 aa35.39■■■■□ 3.26
RTBDN-201ENST00000322912 RSF1Q96T23 1441 aaPredicted RBP35.26■■■■□ 3.23
RTBDN-201ENST00000322912 LAMC3Q9Y6N6 1575 aa35.15■■■■□ 3.22
RTBDN-201ENST00000322912 CUX2O14529 1486 aa35.13■■■■□ 3.22
RTBDN-201ENST00000322912 CADPSQ9ULU8 1353 aa35.02■■■■□ 3.2
RTBDN-201ENST00000322912 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
RTBDN-201ENST00000322912 TOP2AP11388 1531 aaKnown RBP34.95■■■■□ 3.19
RTBDN-201ENST00000322912 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
RTBDN-201ENST00000322912 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
RTBDN-201ENST00000322912 CFTRP13569 1480 aa34.71■■■■□ 3.15
RTBDN-201ENST00000322912 DNAJC5Q9H3Z4 198 aa34.68■■■■□ 3.14
RTBDN-201ENST00000322912 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
RTBDN-201ENST00000322912 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
RTBDN-201ENST00000322912 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
RTBDN-201ENST00000322912 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
RTBDN-201ENST00000322912 WDR62O43379 1518 aa34.55■■■■□ 3.12
RTBDN-201ENST00000322912 URB2Q14146 1524 aaKnown RBP34.34■■■■□ 3.09
RTBDN-201ENST00000322912 PRDM2Q13029 1718 aa34.31■■■■□ 3.08
RTBDN-201ENST00000322912 SUPT5HO00267 1087 aaKnown RBP34.09■■■■□ 3.05
RTBDN-201ENST00000322912 TOPBP1Q92547 1522 aa34.02■■■■□ 3.04
RTBDN-201ENST00000322912 DNMBPQ6XZF7 1577 aa33.91■■■■□ 3.02
RTBDN-201ENST00000322912 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
RTBDN-201ENST00000322912 IFT140Q96RY7 1462 aa33.89■■■■□ 3.02
RTBDN-201ENST00000322912 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
RTBDN-201ENST00000322912 POLA1P09884 1462 aaPredicted RBP33.71■■■□□ 2.99
RTBDN-201ENST00000322912 TARBP1Q13395 1621 aaKnown RBP33.67■■■□□ 2.98
RTBDN-201ENST00000322912 OSCARQ8IYS5 282 aa33.66■■■□□ 2.98
RTBDN-201ENST00000322912 RAD54L2Q9Y4B4 1467 aa33.64■■■□□ 2.98
RTBDN-201ENST00000322912 CUX1P39880 1505 aa33.64■■■□□ 2.98
RTBDN-201ENST00000322912 EIF4G3O43432 1585 aaKnown RBP33.64■■■□□ 2.98
RTBDN-201ENST00000322912 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.97
RTBDN-201ENST00000322912 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.96
RTBDN-201ENST00000322912 SOGA1O94964 1423 aa33.57■■■□□ 2.96
RTBDN-201ENST00000322912 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
RTBDN-201ENST00000322912 TRIM41Q8WV44 630 aa33.41■■■□□ 2.94
RTBDN-201ENST00000322912 FBLN2P98095 1184 aa33.31■■■□□ 2.92
RTBDN-201ENST00000322912 CHD1O14646 1710 aa33.3■■■□□ 2.92
RTBDN-201ENST00000322912 SNAPC4Q5SXM2 1469 aa33.26■■■□□ 2.92
RTBDN-201ENST00000322912 WDR97A6NE52 1622 aa33.26■■■□□ 2.91
RTBDN-201ENST00000322912 WRNQ14191 1432 aaPredicted RBP eCLIP33.22■■■□□ 2.91
RTBDN-201ENST00000322912 GRIN2BQ13224 1484 aa33.2■■■□□ 2.9
RTBDN-201ENST00000322912 ABCA10Q8WWZ4 1543 aa33.19■■■□□ 2.9
RTBDN-201ENST00000322912 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
RTBDN-201ENST00000322912 RIMBP3CA6NJZ7 1639 aa33.17■■■□□ 2.9
RTBDN-201ENST00000322912 RIMBP3BA6NNM3 1639 aa33.17■■■□□ 2.9
RTBDN-201ENST00000322912 RIMBP3Q9UFD9 1639 aa33.17■■■□□ 2.9
RTBDN-201ENST00000322912 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
RTBDN-201ENST00000322912 GAPVD1Q14C86 1478 aa33.16■■■□□ 2.9
RTBDN-201ENST00000322912 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
RTBDN-201ENST00000322912 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
RTBDN-201ENST00000322912 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
RTBDN-201ENST00000322912 CHMP7Q8WUX9 453 aaPredicted RBP33.1■■■□□ 2.89
RTBDN-201ENST00000322912 ABCA5Q8WWZ7 1642 aa33.09■■■□□ 2.89
RTBDN-201ENST00000322912 PBRM1Q86U86 1689 aa33.08■■■□□ 2.89
RTBDN-201ENST00000322912 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
RTBDN-201ENST00000322912 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
RTBDN-201ENST00000322912 CYB5RLQ6IPT4 315 aa32.9■■■□□ 2.86
RTBDN-201ENST00000322912 ARAP1Q96P48 1450 aa32.85■■■□□ 2.85
RTBDN-201ENST00000322912 ADAMTS12P58397 1594 aa32.82■■■□□ 2.84
RTBDN-201ENST00000322912 GRIN2AQ12879 1464 aa32.78■■■□□ 2.84
RTBDN-201ENST00000322912 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
RTBDN-201ENST00000322912 FHAD1B1AJZ9 1412 aa32.74■■■□□ 2.83
RTBDN-201ENST00000322912 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
RTBDN-201ENST00000322912 NUP160Q12769 1436 aa32.67■■■□□ 2.82
RTBDN-201ENST00000322912 ERCC6L2Q5T890 1561 aa32.54■■■□□ 2.8
RTBDN-201ENST00000322912 KIF27Q86VH2 1401 aa32.54■■■□□ 2.8
RTBDN-201ENST00000322912 IGF1RP08069 1367 aa32.52■■■□□ 2.8
RTBDN-201ENST00000322912 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
RTBDN-201ENST00000322912 TRHP20396 242 aaPredicted RBP32.37■■■□□ 2.77
RTBDN-201ENST00000322912 JPH4Q96JJ6 628 aa32.35■■■□□ 2.77
RTBDN-201ENST00000322912 CUL7Q14999 1698 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms