RNA–Protein interactions for RNA: ENST00000374072.5

ROMO1-202, Transcript of reactive oxygen species modulator 1, humanhuman

TSL 5 BASIC

Gene ROMO1, Length 350 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-202ENST00000374072 NISCHQ9Y2I1 1504 aa45.96■■■■■ 4.95
ROMO1-202ENST00000374072 CCDC180Q9P1Z9 1646 aa41.04■■■■■ 4.16
ROMO1-202ENST00000374072 ABCC9O60706 1549 aa40.3■■■■■ 4.04
ROMO1-202ENST00000374072 RB1CC1Q8TDY2 1594 aa38.71■■■■□ 3.79
ROMO1-202ENST00000374072 NACADO15069 1562 aa38.61■■■■□ 3.77
ROMO1-202ENST00000374072 DCAF8L2P0C7V8 631 aa38.4■■■■□ 3.74
ROMO1-202ENST00000374072 MYO15BQ96JP2 1530 aa38.32■■■■□ 3.72
ROMO1-202ENST00000374072 ZCCHC6Q5VYS8 1495 aaKnown RBP38.24■■■■□ 3.71
ROMO1-202ENST00000374072 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
ROMO1-202ENST00000374072 UNC13AQ9UPW8 1703 aa37.84■■■■□ 3.65
ROMO1-202ENST00000374072 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
ROMO1-202ENST00000374072 BICRAQ9NZM4 1560 aa37.52■■■■□ 3.6
ROMO1-202ENST00000374072 SCRIBQ14160 1630 aa37.36■■■■□ 3.57
ROMO1-202ENST00000374072 SHROOM4Q9ULL8 1493 aa37.18■■■■□ 3.54
ROMO1-202ENST00000374072 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
ROMO1-202ENST00000374072 EIF4G1Q04637 1599 aaKnown RBP36.57■■■■□ 3.44
ROMO1-202ENST00000374072 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
ROMO1-202ENST00000374072 CECR2Q9BXF3 1484 aa36.25■■■■□ 3.39
ROMO1-202ENST00000374072 SMARCA4P51532 1647 aa35.73■■■■□ 3.31
ROMO1-202ENST00000374072 BAZ1AQ9NRL2 1556 aaPredicted RBP35.66■■■■□ 3.3
ROMO1-202ENST00000374072 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
ROMO1-202ENST00000374072 ATAD2BQ9ULI0 1458 aa35.58■■■■□ 3.29
ROMO1-202ENST00000374072 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
ROMO1-202ENST00000374072 HMGXB3Q12766 1538 aa35.44■■■■□ 3.26
ROMO1-202ENST00000374072 PEG3Q9GZU2 1588 aa35.4■■■■□ 3.26
ROMO1-202ENST00000374072 MROH2BQ7Z745 1585 aa35.39■■■■□ 3.26
ROMO1-202ENST00000374072 BAZ1BQ9UIG0 1483 aaKnown RBP35.29■■■■□ 3.24
ROMO1-202ENST00000374072 WIZO95785 1651 aa35.01■■■■□ 3.2
ROMO1-202ENST00000374072 RSF1Q96T23 1441 aaPredicted RBP34.89■■■■□ 3.18
ROMO1-202ENST00000374072 NESP48681 1621 aa34.8■■■■□ 3.16
ROMO1-202ENST00000374072 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
ROMO1-202ENST00000374072 LAMC3Q9Y6N6 1575 aa34.73■■■■□ 3.15
ROMO1-202ENST00000374072 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
ROMO1-202ENST00000374072 CADPSQ9ULU8 1353 aa34.54■■■■□ 3.12
ROMO1-202ENST00000374072 CUX2O14529 1486 aa34.53■■■■□ 3.12
ROMO1-202ENST00000374072 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
ROMO1-202ENST00000374072 KIF21AQ7Z4S6 1674 aa34.42■■■■□ 3.1
ROMO1-202ENST00000374072 THOC2Q8NI27 1593 aaKnown RBP34.38■■■■□ 3.09
ROMO1-202ENST00000374072 CFTRP13569 1480 aa34.29■■■■□ 3.08
ROMO1-202ENST00000374072 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
ROMO1-202ENST00000374072 FANCD2Q9BXW9 1451 aa34.15■■■■□ 3.06
ROMO1-202ENST00000374072 MRC2Q9UBG0 1479 aa34.15■■■■□ 3.06
ROMO1-202ENST00000374072 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
ROMO1-202ENST00000374072 PRDM2Q13029 1718 aa34.09■■■■□ 3.05
ROMO1-202ENST00000374072 WDR62O43379 1518 aa34.06■■■■□ 3.04
ROMO1-202ENST00000374072 URB2Q14146 1524 aaKnown RBP33.82■■■■□ 3
ROMO1-202ENST00000374072 SUPT5HO00267 1087 aaKnown RBP33.76■■■□□ 2.99
ROMO1-202ENST00000374072 DNAJC5Q9H3Z4 198 aa33.69■■■□□ 2.98
ROMO1-202ENST00000374072 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
ROMO1-202ENST00000374072 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
ROMO1-202ENST00000374072 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
ROMO1-202ENST00000374072 IFT140Q96RY7 1462 aa33.44■■■□□ 2.94
ROMO1-202ENST00000374072 ZNF608Q9ULD9 1512 aaPredicted RBP33.28■■■□□ 2.92
ROMO1-202ENST00000374072 POLA1P09884 1462 aaPredicted RBP33.28■■■□□ 2.92
ROMO1-202ENST00000374072 TARBP1Q13395 1621 aaKnown RBP33.24■■■□□ 2.91
ROMO1-202ENST00000374072 CUX1P39880 1505 aa33.23■■■□□ 2.91
ROMO1-202ENST00000374072 EIF4G3O43432 1585 aaKnown RBP33.19■■■□□ 2.9
ROMO1-202ENST00000374072 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
ROMO1-202ENST00000374072 SOGA1O94964 1423 aa33.11■■■□□ 2.89
ROMO1-202ENST00000374072 RAD54L2Q9Y4B4 1467 aa33.11■■■□□ 2.89
ROMO1-202ENST00000374072 AQRO60306 1485 aaKnown RBP eCLIP33.05■■■□□ 2.881e-6■■■■■ 32.7
ROMO1-202ENST00000374072 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
ROMO1-202ENST00000374072 OSCARQ8IYS5 282 aa32.99■■■□□ 2.87
ROMO1-202ENST00000374072 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.86
ROMO1-202ENST00000374072 WRNQ14191 1432 aaPredicted RBP eCLIP32.93■■■□□ 2.86
ROMO1-202ENST00000374072 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
ROMO1-202ENST00000374072 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
ROMO1-202ENST00000374072 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
ROMO1-202ENST00000374072 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
ROMO1-202ENST00000374072 CHD1O14646 1710 aa32.82■■■□□ 2.84
ROMO1-202ENST00000374072 GRIN2BQ13224 1484 aa32.79■■■□□ 2.84
ROMO1-202ENST00000374072 SNAPC4Q5SXM2 1469 aa32.77■■■□□ 2.84
ROMO1-202ENST00000374072 ABCA5Q8WWZ7 1642 aa32.75■■■□□ 2.83
ROMO1-202ENST00000374072 GAPVD1Q14C86 1478 aa32.74■■■□□ 2.83
ROMO1-202ENST00000374072 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
ROMO1-202ENST00000374072 PBRM1Q86U86 1689 aa32.74■■■□□ 2.83
ROMO1-202ENST00000374072 FBLN2P98095 1184 aa32.68■■■□□ 2.82
ROMO1-202ENST00000374072 SYNJ2O15056 1496 aa32.61■■■□□ 2.81
ROMO1-202ENST00000374072 CHMP7Q8WUX9 453 aaPredicted RBP32.57■■■□□ 2.8
ROMO1-202ENST00000374072 RIMBP3CA6NJZ7 1639 aa32.54■■■□□ 2.8
ROMO1-202ENST00000374072 RIMBP3BA6NNM3 1639 aa32.54■■■□□ 2.8
ROMO1-202ENST00000374072 RIMBP3Q9UFD9 1639 aa32.54■■■□□ 2.8
ROMO1-202ENST00000374072 ARHGEF11O15085 1522 aa32.5■■■□□ 2.79
ROMO1-202ENST00000374072 ADAMTS12P58397 1594 aa32.46■■■□□ 2.79
ROMO1-202ENST00000374072 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
ROMO1-202ENST00000374072 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
ROMO1-202ENST00000374072 CLASP1Q7Z460 1538 aa32.46■■■□□ 2.79
ROMO1-202ENST00000374072 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
ROMO1-202ENST00000374072 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
ROMO1-202ENST00000374072 KIF27Q86VH2 1401 aa32.26■■■□□ 2.75
ROMO1-202ENST00000374072 NUP160Q12769 1436 aa32.23■■■□□ 2.75
ROMO1-202ENST00000374072 ARAP1Q96P48 1450 aa32.22■■■□□ 2.75
ROMO1-202ENST00000374072 CEP170Q5SW79 1584 aa32.21■■■□□ 2.75
ROMO1-202ENST00000374072 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
ROMO1-202ENST00000374072 CUL7Q14999 1698 aa32.14■■■□□ 2.74
ROMO1-202ENST00000374072 IGF1RP08069 1367 aa32.13■■■□□ 2.73
ROMO1-202ENST00000374072 SHROOM2Q13796 1616 aa32.05■■■□□ 2.72
ROMO1-202ENST00000374072 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
ROMO1-202ENST00000374072 ERCC6L2Q5T890 1561 aa31.94■■■□□ 2.7
ROMO1-202ENST00000374072 CARMIL1Q5VZK9 1371 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms