RNA–Protein interactions for RNA: ENST00000489116.1

COX11P1-201, Transcript of COX11, cytochrome c oxidase copper chaperone pseudogene 1, humanhuman

BASIC

Gene COX11P1, Length 835 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11P1-201ENST00000489116 NISCHQ9Y2I1 1504 aa45.99■■■■■ 4.95
COX11P1-201ENST00000489116 CCDC180Q9P1Z9 1646 aa41.04■■■■■ 4.16
COX11P1-201ENST00000489116 ABCC9O60706 1549 aa40.57■■■■■ 4.09
COX11P1-201ENST00000489116 RB1CC1Q8TDY2 1594 aa38.86■■■■□ 3.81
COX11P1-201ENST00000489116 NACADO15069 1562 aa38.72■■■■□ 3.79
COX11P1-201ENST00000489116 DCAF8L2P0C7V8 631 aa38.67■■■■□ 3.78
COX11P1-201ENST00000489116 MYO15BQ96JP2 1530 aa38.36■■■■□ 3.73
COX11P1-201ENST00000489116 ZCCHC6Q5VYS8 1495 aaKnown RBP38.21■■■■□ 3.71
COX11P1-201ENST00000489116 DCAF1Q9Y4B6 1507 aa38.04■■■■□ 3.68
COX11P1-201ENST00000489116 UNC13AQ9UPW8 1703 aa37.9■■■■□ 3.66
COX11P1-201ENST00000489116 PABPN1Q86U42 306 aaKnown RBP eCLIP37.87■■■■□ 3.65
COX11P1-201ENST00000489116 BICRAQ9NZM4 1560 aa37.65■■■■□ 3.62
COX11P1-201ENST00000489116 DNAJC5BQ9UF47 199 aa37.6■■■■□ 3.61
COX11P1-201ENST00000489116 SCRIBQ14160 1630 aa37.42■■■■□ 3.58
COX11P1-201ENST00000489116 SHROOM4Q9ULL8 1493 aa37.27■■■■□ 3.56
COX11P1-201ENST00000489116 EIF4G1Q04637 1599 aaKnown RBP36.72■■■■□ 3.47
COX11P1-201ENST00000489116 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
COX11P1-201ENST00000489116 CECR2Q9BXF3 1484 aa36.51■■■■□ 3.44
COX11P1-201ENST00000489116 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
COX11P1-201ENST00000489116 NCAPD3P42695 1498 aa35.74■■■■□ 3.31
COX11P1-201ENST00000489116 BAZ1AQ9NRL2 1556 aaPredicted RBP35.69■■■■□ 3.3
COX11P1-201ENST00000489116 ATAD2BQ9ULI0 1458 aa35.69■■■■□ 3.3
COX11P1-201ENST00000489116 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
COX11P1-201ENST00000489116 HMGXB3Q12766 1538 aa35.5■■■■□ 3.27
COX11P1-201ENST00000489116 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
COX11P1-201ENST00000489116 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
COX11P1-201ENST00000489116 BAZ1BQ9UIG0 1483 aaKnown RBP35.38■■■■□ 3.25
COX11P1-201ENST00000489116 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
COX11P1-201ENST00000489116 WIZO95785 1651 aa35.01■■■■□ 3.2
COX11P1-201ENST00000489116 NESP48681 1621 aa34.97■■■■□ 3.19
COX11P1-201ENST00000489116 RSF1Q96T23 1441 aaPredicted RBP34.89■■■■□ 3.18
COX11P1-201ENST00000489116 LAMC3Q9Y6N6 1575 aa34.85■■■■□ 3.17
COX11P1-201ENST00000489116 CUX2O14529 1486 aa34.79■■■■□ 3.16
COX11P1-201ENST00000489116 CADPSQ9ULU8 1353 aa34.69■■■■□ 3.14
COX11P1-201ENST00000489116 PDS5BQ9NTI5 1447 aa34.67■■■■□ 3.14
COX11P1-201ENST00000489116 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
COX11P1-201ENST00000489116 KIF21AQ7Z4S6 1674 aa34.52■■■■□ 3.12
COX11P1-201ENST00000489116 THOC2Q8NI27 1593 aaKnown RBP34.51■■■■□ 3.12
COX11P1-201ENST00000489116 CFTRP13569 1480 aa34.38■■■■□ 3.09
COX11P1-201ENST00000489116 MRC2Q9UBG0 1479 aa34.31■■■■□ 3.08
COX11P1-201ENST00000489116 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
COX11P1-201ENST00000489116 CEP164Q9UPV0 1460 aa34.27■■■■□ 3.08
COX11P1-201ENST00000489116 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
COX11P1-201ENST00000489116 DNAJC5Q9H3Z4 198 aa34.22■■■■□ 3.07
COX11P1-201ENST00000489116 WDR62O43379 1518 aa34.19■■■■□ 3.06
COX11P1-201ENST00000489116 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
COX11P1-201ENST00000489116 URB2Q14146 1524 aaKnown RBP33.94■■■■□ 3.02
COX11P1-201ENST00000489116 SUPT5HO00267 1087 aaKnown RBP33.76■■■□□ 2.99
COX11P1-201ENST00000489116 ABCC8Q09428 1581 aa33.69■■■□□ 2.98
COX11P1-201ENST00000489116 TOPBP1Q92547 1522 aa33.68■■■□□ 2.98
COX11P1-201ENST00000489116 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
COX11P1-201ENST00000489116 IFT140Q96RY7 1462 aa33.58■■■□□ 2.97
COX11P1-201ENST00000489116 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
COX11P1-201ENST00000489116 POLA1P09884 1462 aaPredicted RBP33.36■■■□□ 2.93
COX11P1-201ENST00000489116 OSCARQ8IYS5 282 aa33.33■■■□□ 2.93
COX11P1-201ENST00000489116 TARBP1Q13395 1621 aaKnown RBP33.31■■■□□ 2.92
COX11P1-201ENST00000489116 EIF4G3O43432 1585 aaKnown RBP33.27■■■□□ 2.92
COX11P1-201ENST00000489116 CUX1P39880 1505 aa33.25■■■□□ 2.91
COX11P1-201ENST00000489116 SOGA1O94964 1423 aa33.25■■■□□ 2.91
COX11P1-201ENST00000489116 FGD5Q6ZNL6 1462 aa33.23■■■□□ 2.91
COX11P1-201ENST00000489116 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
COX11P1-201ENST00000489116 AQRO60306 1485 aaKnown RBP eCLIP33.22■■■□□ 2.91
COX11P1-201ENST00000489116 TDRD9Q8NDG6 1382 aaKnown RBP33.1■■■□□ 2.89
COX11P1-201ENST00000489116 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
COX11P1-201ENST00000489116 FBLN2P98095 1184 aa32.95■■■□□ 2.87
COX11P1-201ENST00000489116 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
COX11P1-201ENST00000489116 TRIM41Q8WV44 630 aa32.93■■■□□ 2.86
COX11P1-201ENST00000489116 CHD1O14646 1710 aa32.91■■■□□ 2.86
COX11P1-201ENST00000489116 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
COX11P1-201ENST00000489116 ABCA10Q8WWZ4 1543 aa32.89■■■□□ 2.86
COX11P1-201ENST00000489116 SNAPC4Q5SXM2 1469 aa32.89■■■□□ 2.86
COX11P1-201ENST00000489116 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
COX11P1-201ENST00000489116 BIVM-ERCC5R4GMW8 1640 aa32.85■■■□□ 2.85
COX11P1-201ENST00000489116 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
COX11P1-201ENST00000489116 MAGI1Q96QZ7 1491 aaPredicted RBP32.85■■■□□ 2.85
COX11P1-201ENST00000489116 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
COX11P1-201ENST00000489116 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
COX11P1-201ENST00000489116 RIMBP3CA6NJZ7 1639 aa32.76■■■□□ 2.83
COX11P1-201ENST00000489116 RIMBP3BA6NNM3 1639 aa32.76■■■□□ 2.83
COX11P1-201ENST00000489116 ABCA5Q8WWZ7 1642 aa32.76■■■□□ 2.83
COX11P1-201ENST00000489116 RIMBP3Q9UFD9 1639 aa32.76■■■□□ 2.83
COX11P1-201ENST00000489116 PBRM1Q86U86 1689 aa32.75■■■□□ 2.83
COX11P1-201ENST00000489116 SYNJ2O15056 1496 aa32.73■■■□□ 2.83
COX11P1-201ENST00000489116 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
COX11P1-201ENST00000489116 CLASP1Q7Z460 1538 aa32.57■■■□□ 2.8
COX11P1-201ENST00000489116 CYB5RLQ6IPT4 315 aa32.49■■■□□ 2.79
COX11P1-201ENST00000489116 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
COX11P1-201ENST00000489116 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
COX11P1-201ENST00000489116 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
COX11P1-201ENST00000489116 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
COX11P1-201ENST00000489116 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
COX11P1-201ENST00000489116 NUP160Q12769 1436 aa32.33■■■□□ 2.77
COX11P1-201ENST00000489116 CEP170Q5SW79 1584 aa32.29■■■□□ 2.76
COX11P1-201ENST00000489116 KIF27Q86VH2 1401 aa32.29■■■□□ 2.76
COX11P1-201ENST00000489116 IGF1RP08069 1367 aa32.2■■■□□ 2.75
COX11P1-201ENST00000489116 CUL7Q14999 1698 aa32.11■■■□□ 2.73
COX11P1-201ENST00000489116 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
COX11P1-201ENST00000489116 ERCC6L2Q5T890 1561 aa32.07■■■□□ 2.72
COX11P1-201ENST00000489116 JPH4Q96JJ6 628 aa32.05■■■□□ 2.72
COX11P1-201ENST00000489116 CARMIL1Q5VZK9 1371 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms