RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NISCHQ9Y2I1 1504 aa44.94■■■■■ 4.78
CYSTM1-201ENST00000261811 CCDC180Q9P1Z9 1646 aa40■■■■□ 3.99
CYSTM1-201ENST00000261811 ABCC9O60706 1549 aa38.76■■■■□ 3.8
CYSTM1-201ENST00000261811 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
CYSTM1-201ENST00000261811 NACADO15069 1562 aa37.5■■■■□ 3.59
CYSTM1-201ENST00000261811 DCAF8L2P0C7V8 631 aa37.5■■■■□ 3.59
CYSTM1-201ENST00000261811 ZCCHC6Q5VYS8 1495 aaKnown RBP37.46■■■■□ 3.59
CYSTM1-201ENST00000261811 MYO15BQ96JP2 1530 aa37.32■■■■□ 3.57
CYSTM1-201ENST00000261811 DCAF1Q9Y4B6 1507 aa37.23■■■■□ 3.55
CYSTM1-201ENST00000261811 UNC13AQ9UPW8 1703 aa36.69■■■■□ 3.46
CYSTM1-201ENST00000261811 SCRIBQ14160 1630 aa36.41■■■■□ 3.42
CYSTM1-201ENST00000261811 BICRAQ9NZM4 1560 aa36.22■■■■□ 3.39
CYSTM1-201ENST00000261811 PABPN1Q86U42 306 aaKnown RBP eCLIP36.21■■■■□ 3.39
CYSTM1-201ENST00000261811 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
CYSTM1-201ENST00000261811 EIF4G1Q04637 1599 aaKnown RBP35.31■■■■□ 3.24
CYSTM1-201ENST00000261811 DNAJC5BQ9UF47 199 aa35.22■■■■□ 3.23
CYSTM1-201ENST00000261811 CC2D2AQ9P2K1 1620 aa35.13■■■■□ 3.21
CYSTM1-201ENST00000261811 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
CYSTM1-201ENST00000261811 BAZ1AQ9NRL2 1556 aaPredicted RBP34.88■■■■□ 3.17
CYSTM1-201ENST00000261811 SMARCA4P51532 1647 aa34.87■■■■□ 3.17
CYSTM1-201ENST00000261811 SMARCA2P51531 1590 aa34.63■■■■□ 3.13
CYSTM1-201ENST00000261811 MROH2BQ7Z745 1585 aa34.59■■■■□ 3.13
CYSTM1-201ENST00000261811 ATAD2BQ9ULI0 1458 aa34.54■■■■□ 3.12
CYSTM1-201ENST00000261811 NCAPD3P42695 1498 aa34.52■■■■□ 3.12
CYSTM1-201ENST00000261811 PEG3Q9GZU2 1588 aa34.51■■■■□ 3.11
CYSTM1-201ENST00000261811 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
CYSTM1-201ENST00000261811 BAZ1BQ9UIG0 1483 aaKnown RBP34.35■■■■□ 3.09
CYSTM1-201ENST00000261811 WIZO95785 1651 aa34.3■■■■□ 3.08
CYSTM1-201ENST00000261811 RSF1Q96T23 1441 aaPredicted RBP34.27■■■■□ 3.08
CYSTM1-201ENST00000261811 TOP2AP11388 1531 aaKnown RBP33.95■■■■□ 3.03
CYSTM1-201ENST00000261811 LAMC3Q9Y6N6 1575 aa33.67■■■□□ 2.98
CYSTM1-201ENST00000261811 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
CYSTM1-201ENST00000261811 NESP48681 1621 aa33.56■■■□□ 2.96
CYSTM1-201ENST00000261811 CADPSQ9ULU8 1353 aa33.52■■■□□ 2.96
CYSTM1-201ENST00000261811 CCDC88BA6NC98 1476 aa33.5■■■□□ 2.95
CYSTM1-201ENST00000261811 ERCC6Q03468 1493 aa33.49■■■□□ 2.95
CYSTM1-201ENST00000261811 PDS5BQ9NTI5 1447 aa33.41■■■□□ 2.94
CYSTM1-201ENST00000261811 CFTRP13569 1480 aa33.37■■■□□ 2.93
CYSTM1-201ENST00000261811 PRDM2Q13029 1718 aa33.37■■■□□ 2.93
CYSTM1-201ENST00000261811 KIF21AQ7Z4S6 1674 aa33.33■■■□□ 2.93
CYSTM1-201ENST00000261811 FANCD2Q9BXW9 1451 aa33.16■■■□□ 2.9
CYSTM1-201ENST00000261811 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
CYSTM1-201ENST00000261811 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
CYSTM1-201ENST00000261811 CUX2O14529 1486 aa33.04■■■□□ 2.88
CYSTM1-201ENST00000261811 MRC2Q9UBG0 1479 aa33.01■■■□□ 2.88
CYSTM1-201ENST00000261811 WDR62O43379 1518 aa32.89■■■□□ 2.86
CYSTM1-201ENST00000261811 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
CYSTM1-201ENST00000261811 URB2Q14146 1524 aaKnown RBP32.76■■■□□ 2.83
CYSTM1-201ENST00000261811 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
CYSTM1-201ENST00000261811 TOPBP1Q92547 1522 aa32.65■■■□□ 2.82
CYSTM1-201ENST00000261811 CUX1P39880 1505 aa32.45■■■□□ 2.78
CYSTM1-201ENST00000261811 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
CYSTM1-201ENST00000261811 WRNQ14191 1432 aaPredicted RBP eCLIP32.37■■■□□ 2.77
CYSTM1-201ENST00000261811 POLA1P09884 1462 aaPredicted RBP32.36■■■□□ 2.77
CYSTM1-201ENST00000261811 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
CYSTM1-201ENST00000261811 BIVM-ERCC5R4GMW8 1640 aa32.34■■■□□ 2.77
CYSTM1-201ENST00000261811 TOP2BQ02880 1626 aa32.31■■■□□ 2.76
CYSTM1-201ENST00000261811 TARBP1Q13395 1621 aaKnown RBP32.29■■■□□ 2.76
CYSTM1-201ENST00000261811 SOGA1O94964 1423 aa32.28■■■□□ 2.76
CYSTM1-201ENST00000261811 SYNJ1O43426 1573 aa32.25■■■□□ 2.75
CYSTM1-201ENST00000261811 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
CYSTM1-201ENST00000261811 RAD54L2Q9Y4B4 1467 aa32.18■■■□□ 2.74
CYSTM1-201ENST00000261811 WDR97A6NE52 1622 aa32.16■■■□□ 2.74
CYSTM1-201ENST00000261811 ZNF608Q9ULD9 1512 aaPredicted RBP32.15■■■□□ 2.74
CYSTM1-201ENST00000261811 EIF4G3O43432 1585 aaKnown RBP32.15■■■□□ 2.74
CYSTM1-201ENST00000261811 ABCA10Q8WWZ4 1543 aa32.04■■■□□ 2.72
CYSTM1-201ENST00000261811 AQRO60306 1485 aaKnown RBP eCLIP32.03■■■□□ 2.72
CYSTM1-201ENST00000261811 TDRD9Q8NDG6 1382 aaKnown RBP32.01■■■□□ 2.71
CYSTM1-201ENST00000261811 PBRM1Q86U86 1689 aa31.94■■■□□ 2.7
CYSTM1-201ENST00000261811 ABCA5Q8WWZ7 1642 aa31.92■■■□□ 2.7
CYSTM1-201ENST00000261811 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
CYSTM1-201ENST00000261811 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
CYSTM1-201ENST00000261811 TRIM41Q8WV44 630 aa31.8■■■□□ 2.68
CYSTM1-201ENST00000261811 MAGI1Q96QZ7 1491 aaPredicted RBP31.8■■■□□ 2.68
CYSTM1-201ENST00000261811 SNAPC4Q5SXM2 1469 aa31.77■■■□□ 2.68
CYSTM1-201ENST00000261811 CHD1O14646 1710 aa31.76■■■□□ 2.68
CYSTM1-201ENST00000261811 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
CYSTM1-201ENST00000261811 ERICH3Q5RHP9 1530 aa31.71■■■□□ 2.67
CYSTM1-201ENST00000261811 OSCARQ8IYS5 282 aa31.71■■■□□ 2.67
CYSTM1-201ENST00000261811 FBLN2P98095 1184 aa31.69■■■□□ 2.66
CYSTM1-201ENST00000261811 SYNJ2O15056 1496 aa31.65■■■□□ 2.66
CYSTM1-201ENST00000261811 CHMP7Q8WUX9 453 aaPredicted RBP31.65■■■□□ 2.66
CYSTM1-201ENST00000261811 ADAMTS12P58397 1594 aa31.59■■■□□ 2.65
CYSTM1-201ENST00000261811 FHAD1B1AJZ9 1412 aa31.55■■■□□ 2.64
CYSTM1-201ENST00000261811 CUL7Q14999 1698 aa31.54■■■□□ 2.64
CYSTM1-201ENST00000261811 IGF1RP08069 1367 aa31.46■■■□□ 2.63
CYSTM1-201ENST00000261811 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
CYSTM1-201ENST00000261811 CHIC1Q5VXU3 224 aa31.46■■■□□ 2.63
CYSTM1-201ENST00000261811 RUSC2Q8N2Y8 1516 aa31.35■■■□□ 2.61
CYSTM1-201ENST00000261811 CARMIL1Q5VZK9 1371 aa31.34■■■□□ 2.61
CYSTM1-201ENST00000261811 CLASP1Q7Z460 1538 aa31.31■■■□□ 2.6
CYSTM1-201ENST00000261811 EEA1Q15075 1411 aa31.3■■■□□ 2.6
CYSTM1-201ENST00000261811 NUP160Q12769 1436 aa31.27■■■□□ 2.6
CYSTM1-201ENST00000261811 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
CYSTM1-201ENST00000261811 RAPGEF2Q9Y4G8 1499 aa31.21■■■□□ 2.59
CYSTM1-201ENST00000261811 RIMBP3CA6NJZ7 1639 aa31.17■■■□□ 2.58
CYSTM1-201ENST00000261811 RIMBP3BA6NNM3 1639 aa31.17■■■□□ 2.58
CYSTM1-201ENST00000261811 RIMBP3Q9UFD9 1639 aa31.17■■■□□ 2.58
CYSTM1-201ENST00000261811 CSRNP3Q8WYN3 585 aa31.16■■■□□ 2.58
CYSTM1-201ENST00000261811 ARHGEF11O15085 1522 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms