Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.5■■□□□ 1.67
CLPBQ9H078 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLPBQ9H078 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CLPBQ9H078 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
CLPBQ9H078 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLPBQ9H078 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.49■■□□□ 1.67
CLPBQ9H078 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.49■■□□□ 1.67
CLPBQ9H078 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CLPBQ9H078 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.47■■□□□ 1.67
CLPBQ9H078 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLPBQ9H078 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLPBQ9H078 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLPBQ9H078 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CLPBQ9H078 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.46■■□□□ 1.67
CLPBQ9H078 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLPBQ9H078 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLPBQ9H078 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLPBQ9H078 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CLPBQ9H078 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
CLPBQ9H078 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.45■■□□□ 1.66
CLPBQ9H078 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLPBQ9H078 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLPBQ9H078 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLPBQ9H078 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CLPBQ9H078 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.44■■□□□ 1.66
CLPBQ9H078 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CLPBQ9H078 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLPBQ9H078 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CLPBQ9H078 AC135983.2-203ENST00000454486 1613 ntBASIC25.44■■□□□ 1.66
CLPBQ9H078 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CLPBQ9H078 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CLPBQ9H078 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CLPBQ9H078 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.42■■□□□ 1.66
CLPBQ9H078 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLPBQ9H078 HSD17B1P1-201ENST00000590052 955 ntBASIC25.42■■□□□ 1.66
CLPBQ9H078 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLPBQ9H078 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLPBQ9H078 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLPBQ9H078 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.41■■□□□ 1.66
CLPBQ9H078 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLPBQ9H078 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLPBQ9H078 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLPBQ9H078 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
CLPBQ9H078 DRD5P2-201ENST00000421395 2012 ntBASIC25.4■■□□□ 1.66
CLPBQ9H078 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLPBQ9H078 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLPBQ9H078 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLPBQ9H078 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLPBQ9H078 WHAMMP2-203ENST00000563942 1603 ntBASIC25.39■■□□□ 1.66
CLPBQ9H078 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.39■■□□□ 1.65
CLPBQ9H078 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLPBQ9H078 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLPBQ9H078 AC100797.4-201ENST00000631653 1827 ntBASIC25.38■■□□□ 1.65
CLPBQ9H078 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.38■■□□□ 1.65
CLPBQ9H078 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLPBQ9H078 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.37■■□□□ 1.65
CLPBQ9H078 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.37■■□□□ 1.65
CLPBQ9H078 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.37■■□□□ 1.65
CLPBQ9H078 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.37■■□□□ 1.65
CLPBQ9H078 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLPBQ9H078 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.37■■□□□ 1.65
CLPBQ9H078 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLPBQ9H078 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.36■■□□□ 1.65
CLPBQ9H078 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLPBQ9H078 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLPBQ9H078 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.35■■□□□ 1.65
CLPBQ9H078 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.35■■□□□ 1.65
CLPBQ9H078 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLPBQ9H078 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CLPBQ9H078 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CLPBQ9H078 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLPBQ9H078 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLPBQ9H078 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLPBQ9H078 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLPBQ9H078 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLPBQ9H078 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CLPBQ9H078 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.33■■□□□ 1.65
CLPBQ9H078 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLPBQ9H078 AC142086.6-201ENST00000621154 1765 ntBASIC25.33■■□□□ 1.65
CLPBQ9H078 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CLPBQ9H078 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLPBQ9H078 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CLPBQ9H078 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLPBQ9H078 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
CLPBQ9H078 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLPBQ9H078 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.3■■□□□ 1.64
CLPBQ9H078 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLPBQ9H078 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CLPBQ9H078 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.3■■□□□ 1.64
CLPBQ9H078 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLPBQ9H078 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms