Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NKX6-2Q9C056 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
NKX6-2Q9C056 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.5■□□□□ 0.87
NKX6-2Q9C056 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NKX6-2Q9C056 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NKX6-2Q9C056 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-2Q9C056 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX6-2Q9C056 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX6-2Q9C056 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-2Q9C056 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.46■□□□□ 0.87
NKX6-2Q9C056 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-2Q9C056 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-2Q9C056 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-2Q9C056 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-2Q9C056 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-2Q9C056 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-2Q9C056 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-2Q9C056 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-2Q9C056 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NKX6-2Q9C056 AL135925.1-201ENST00000605920 1701 ntBASIC20.44■□□□□ 0.86
NKX6-2Q9C056 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-2Q9C056 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-2Q9C056 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-2Q9C056 LINC00543-201ENST00000567234 1845 ntBASIC20.44■□□□□ 0.86
NKX6-2Q9C056 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-2Q9C056 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NKX6-2Q9C056 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX6-2Q9C056 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NKX6-2Q9C056 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX6-2Q9C056 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
NKX6-2Q9C056 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX6-2Q9C056 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-2Q9C056 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-2Q9C056 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-2Q9C056 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.41■□□□□ 0.86
NKX6-2Q9C056 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-2Q9C056 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX6-2Q9C056 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-2Q9C056 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NKX6-2Q9C056 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
NKX6-2Q9C056 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NKX6-2Q9C056 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-2Q9C056 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-2Q9C056 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.39■□□□□ 0.85
NKX6-2Q9C056 AC012676.1-201ENST00000574705 1949 ntBASIC20.39■□□□□ 0.85
NKX6-2Q9C056 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-2Q9C056 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-2Q9C056 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NKX6-2Q9C056 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-2Q9C056 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-2Q9C056 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NKX6-2Q9C056 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NKX6-2Q9C056 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NKX6-2Q9C056 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NKX6-2Q9C056 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NKX6-2Q9C056 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.36■□□□□ 0.85
NKX6-2Q9C056 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-2Q9C056 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NKX6-2Q9C056 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-2Q9C056 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-2Q9C056 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-2Q9C056 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-2Q9C056 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-2Q9C056 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NKX6-2Q9C056 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-2Q9C056 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NKX6-2Q9C056 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-2Q9C056 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-2Q9C056 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-2Q9C056 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-2Q9C056 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-2Q9C056 CLDN5-201ENST00000403084 2357 ntBASIC20.33■□□□□ 0.85
NKX6-2Q9C056 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NKX6-2Q9C056 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.33■□□□□ 0.84
NKX6-2Q9C056 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NKX6-2Q9C056 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 AC145676.1-201ENST00000514988 2004 ntBASIC20.32■□□□□ 0.84
NKX6-2Q9C056 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX6-2Q9C056 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-2Q9C056 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-2Q9C056 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NKX6-2Q9C056 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-2Q9C056 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-2Q9C056 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms