Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
LPCAT4Q643R3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
LPCAT4Q643R3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LPCAT4Q643R3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LPCAT4Q643R3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LPCAT4Q643R3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
LPCAT4Q643R3 AC006077.2-201ENST00000623591 457 ntBASIC23.97■■□□□ 1.43
LPCAT4Q643R3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.97■■□□□ 1.43
LPCAT4Q643R3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
LPCAT4Q643R3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
LPCAT4Q643R3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LPCAT4Q643R3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.95■■□□□ 1.42
LPCAT4Q643R3 AC145676.1-201ENST00000514988 2004 ntBASIC23.94■■□□□ 1.42
LPCAT4Q643R3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.94■■□□□ 1.42
LPCAT4Q643R3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LPCAT4Q643R3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LPCAT4Q643R3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
LPCAT4Q643R3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
LPCAT4Q643R3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LPCAT4Q643R3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LPCAT4Q643R3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LPCAT4Q643R3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LPCAT4Q643R3 AP004833.2-201ENST00000532228 1454 ntBASIC23.91■■□□□ 1.42
LPCAT4Q643R3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LPCAT4Q643R3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.9■■□□□ 1.42
LPCAT4Q643R3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LPCAT4Q643R3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LPCAT4Q643R3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.89■■□□□ 1.42
LPCAT4Q643R3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
LPCAT4Q643R3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LPCAT4Q643R3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.89■■□□□ 1.41
LPCAT4Q643R3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
LPCAT4Q643R3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LPCAT4Q643R3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.87■■□□□ 1.41
LPCAT4Q643R3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
LPCAT4Q643R3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LPCAT4Q643R3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.87■■□□□ 1.41
LPCAT4Q643R3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LPCAT4Q643R3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.86■■□□□ 1.41
LPCAT4Q643R3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LPCAT4Q643R3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.86■■□□□ 1.41
LPCAT4Q643R3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LPCAT4Q643R3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
LPCAT4Q643R3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LPCAT4Q643R3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LPCAT4Q643R3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LPCAT4Q643R3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.84■■□□□ 1.41
LPCAT4Q643R3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LPCAT4Q643R3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.84■■□□□ 1.41
LPCAT4Q643R3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LPCAT4Q643R3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LPCAT4Q643R3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
LPCAT4Q643R3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.83■■□□□ 1.4
LPCAT4Q643R3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LPCAT4Q643R3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LPCAT4Q643R3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LPCAT4Q643R3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LPCAT4Q643R3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.81■■□□□ 1.4
LPCAT4Q643R3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LPCAT4Q643R3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LPCAT4Q643R3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
LPCAT4Q643R3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LPCAT4Q643R3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LPCAT4Q643R3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.8■■□□□ 1.4
LPCAT4Q643R3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LPCAT4Q643R3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LPCAT4Q643R3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
LPCAT4Q643R3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LPCAT4Q643R3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.79■■□□□ 1.4
LPCAT4Q643R3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LPCAT4Q643R3 WASH5P-204ENST00000632292 975 ntBASIC23.79■■□□□ 1.4
LPCAT4Q643R3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LPCAT4Q643R3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LPCAT4Q643R3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LPCAT4Q643R3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LPCAT4Q643R3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LPCAT4Q643R3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LPCAT4Q643R3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.76■■□□□ 1.39
LPCAT4Q643R3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 DYNLL1-208ENST00000550178 581 ntBASIC23.75■■□□□ 1.39
LPCAT4Q643R3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LPCAT4Q643R3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LPCAT4Q643R3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LPCAT4Q643R3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LPCAT4Q643R3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LPCAT4Q643R3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.74■■□□□ 1.39
LPCAT4Q643R3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LPCAT4Q643R3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LPCAT4Q643R3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
LPCAT4Q643R3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
LPCAT4Q643R3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.72■■□□□ 1.39
LPCAT4Q643R3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LPCAT4Q643R3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms