Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND4P03905 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND4P03905 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND4P03905 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND4P03905 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND4P03905 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.88■■□□□ 1.09
MT-ND4P03905 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND4P03905 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND4P03905 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND4P03905 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND4P03905 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND4P03905 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND4P03905 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND4P03905 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND4P03905 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.87■■□□□ 1.09
MT-ND4P03905 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
MT-ND4P03905 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND4P03905 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND4P03905 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MT-ND4P03905 LINC01003-201ENST00000564834 1764 ntBASIC21.87■■□□□ 1.09
MT-ND4P03905 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND4P03905 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND4P03905 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.86■■□□□ 1.09
MT-ND4P03905 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND4P03905 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND4P03905 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
MT-ND4P03905 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND4P03905 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.85■■□□□ 1.09
MT-ND4P03905 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
MT-ND4P03905 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
MT-ND4P03905 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND4P03905 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND4P03905 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
MT-ND4P03905 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MT-ND4P03905 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
MT-ND4P03905 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MT-ND4P03905 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.83■■□□□ 1.09
MT-ND4P03905 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.83■■□□□ 1.08
MT-ND4P03905 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
MT-ND4P03905 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.82■■□□□ 1.08
MT-ND4P03905 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND4P03905 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND4P03905 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.82■■□□□ 1.08
MT-ND4P03905 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND4P03905 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
MT-ND4P03905 AC091060.1-201ENST00000623524 1766 ntBASIC21.82■■□□□ 1.08
MT-ND4P03905 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.81■■□□□ 1.08
MT-ND4P03905 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
MT-ND4P03905 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.81■■□□□ 1.08
MT-ND4P03905 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND4P03905 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND4P03905 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND4P03905 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-ND4P03905 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND4P03905 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
MT-ND4P03905 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND4P03905 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.8■■□□□ 1.08
MT-ND4P03905 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
MT-ND4P03905 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND4P03905 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND4P03905 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MT-ND4P03905 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND4P03905 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
MT-ND4P03905 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-ND4P03905 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND4P03905 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND4P03905 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND4P03905 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND4P03905 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND4P03905 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND4P03905 AC020928.2-201ENST00000588717 2197 ntBASIC21.77■■□□□ 1.08
MT-ND4P03905 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND4P03905 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.77■■□□□ 1.08
MT-ND4P03905 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND4P03905 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND4P03905 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND4P03905 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND4P03905 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND4P03905 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MT-ND4P03905 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND4P03905 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND4P03905 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND4P03905 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.75■■□□□ 1.07
MT-ND4P03905 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MT-ND4P03905 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
MT-ND4P03905 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.75■■□□□ 1.07
MT-ND4P03905 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-ND4P03905 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND4P03905 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-ND4P03905 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MT-ND4P03905 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.74■■□□□ 1.07
MT-ND4P03905 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND4P03905 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND4P03905 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MT-ND4P03905 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.72■■□□□ 1.07
MT-ND4P03905 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND4P03905 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MT-ND4P03905 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.71■■□□□ 1.07
MT-ND4P03905 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND4P03905 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms