Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.33■□□□□ 0.84
NDUFA3O95167 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA3O95167 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFA3O95167 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFA3O95167 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA3O95167 AP002414.2-202ENST00000590929 1450 ntBASIC20.32■□□□□ 0.84
NDUFA3O95167 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA3O95167 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NDUFA3O95167 LINC01971-201ENST00000617888 1048 ntBASIC20.32■□□□□ 0.84
NDUFA3O95167 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA3O95167 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA3O95167 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA3O95167 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFA3O95167 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.31■□□□□ 0.84
NDUFA3O95167 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NDUFA3O95167 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.31■□□□□ 0.84
NDUFA3O95167 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NDUFA3O95167 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFA3O95167 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA3O95167 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.29■□□□□ 0.84
NDUFA3O95167 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.29■□□□□ 0.84
NDUFA3O95167 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFA3O95167 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.29■□□□□ 0.84
NDUFA3O95167 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA3O95167 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA3O95167 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.28■□□□□ 0.84
NDUFA3O95167 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA3O95167 ZNRF2P2-203ENST00000454624 420 ntBASIC20.27■□□□□ 0.84
NDUFA3O95167 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.27■□□□□ 0.84
NDUFA3O95167 ABHD17AP4-201ENST00000411545 909 ntBASIC20.25■□□□□ 0.83
NDUFA3O95167 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFA3O95167 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA3O95167 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA3O95167 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NDUFA3O95167 AC110285.7-201ENST00000624417 1536 ntBASIC20.23■□□□□ 0.83
NDUFA3O95167 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFA3O95167 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFA3O95167 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFA3O95167 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.22■□□□□ 0.83
NDUFA3O95167 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFA3O95167 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFA3O95167 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.22■□□□□ 0.83
NDUFA3O95167 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
NDUFA3O95167 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NDUFA3O95167 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA3O95167 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFA3O95167 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFA3O95167 DUX4L11-201ENST00000611504 1267 ntBASIC20.21■□□□□ 0.83
NDUFA3O95167 DUX4L12-201ENST00000614593 1267 ntBASIC20.21■□□□□ 0.83
NDUFA3O95167 DUX4L14-201ENST00000621227 1267 ntBASIC20.21■□□□□ 0.83
NDUFA3O95167 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA3O95167 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA3O95167 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA3O95167 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA3O95167 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L13-201ENST00000554103 1267 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L15-201ENST00000611059 1267 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L23-201ENST00000615195 1269 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L24-201ENST00000617576 1269 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L22-201ENST00000618238 1269 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L20-201ENST00000619712 1269 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L21-201ENST00000622058 1269 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L10-201ENST00000622460 1267 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 DUX4L25-201ENST00000624915 1269 ntBASIC20.2■□□□□ 0.82
NDUFA3O95167 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA3O95167 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA3O95167 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.2■□□□□ 0.82
NDUFA3O95167 AC018358.1-201ENST00000631079 1402 ntBASIC20.19■□□□□ 0.82
NDUFA3O95167 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFA3O95167 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFA3O95167 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFA3O95167 BX255925.1-201ENST00000566954 1854 ntBASIC20.18■□□□□ 0.82
NDUFA3O95167 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFA3O95167 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA3O95167 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA3O95167 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA3O95167 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA3O95167 LINC01003-201ENST00000564834 1764 ntBASIC20.17■□□□□ 0.82
NDUFA3O95167 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.17■□□□□ 0.82
NDUFA3O95167 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NDUFA3O95167 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA3O95167 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFA3O95167 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NDUFA3O95167 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFA3O95167 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA3O95167 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA3O95167 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA3O95167 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.15■□□□□ 0.82
NDUFA3O95167 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA3O95167 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NDUFA3O95167 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA3O95167 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA3O95167 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA3O95167 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA3O95167 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.14■□□□□ 0.81
NDUFA3O95167 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NDUFA3O95167 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NDUFA3O95167 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA3O95167 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA3O95167 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms