Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SNAP47Q5SQN1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNAP47Q5SQN1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 ARMC10P1-201ENST00000313754 855 ntBASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 MFAP1P1-201ENST00000442257 1255 ntBASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAP47Q5SQN1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 GABARAPL3-202ENST00000624044 1851 ntBASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 AC091390.4-202ENST00000476426 537 ntBASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 KRT18P35-201ENST00000510488 1269 ntBASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 AL160286.2-201ENST00000567150 934 ntBASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAP47Q5SQN1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 INGX-201ENST00000359239 846 ntBASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 AC128688.1-201ENST00000487626 519 ntBASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 EGLN1P1-201ENST00000531623 762 ntBASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 AC010203.1-204ENST00000548782 407 ntBASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAP47Q5SQN1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 LINC01006-201ENST00000333319 2292 ntBASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 Z85996.1-201ENST00000494644 937 ntBASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms