RNA–Protein interactions for RNA: ENST00000295150.7

FAM228A-201, Transcript of family with sequence similarity 228 member A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FAM228A, Length 1,774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228A-201ENST00000295150 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
FAM228A-201ENST00000295150 CCDC180Q9P1Z9 1646 aa40.65■■■■■ 4.1
FAM228A-201ENST00000295150 ABCC9O60706 1549 aa39.41■■■■□ 3.9
FAM228A-201ENST00000295150 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
FAM228A-201ENST00000295150 DCAF8L2P0C7V8 631 aa38.3■■■■□ 3.72
FAM228A-201ENST00000295150 NACADO15069 1562 aa38.15■■■■□ 3.7
FAM228A-201ENST00000295150 RB1CC1Q8TDY2 1594 aa38.08■■■■□ 3.69
FAM228A-201ENST00000295150 MYO15BQ96JP2 1530 aa38.06■■■■□ 3.68
FAM228A-201ENST00000295150 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
FAM228A-201ENST00000295150 UNC13AQ9UPW8 1703 aa37.16■■■■□ 3.54
FAM228A-201ENST00000295150 SCRIBQ14160 1630 aa37.16■■■■□ 3.54
FAM228A-201ENST00000295150 PABPN1Q86U42 306 aaKnown RBP eCLIP36.92■■■■□ 3.5
FAM228A-201ENST00000295150 BICRAQ9NZM4 1560 aa36.9■■■■□ 3.5
FAM228A-201ENST00000295150 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
FAM228A-201ENST00000295150 EIF4G1Q04637 1599 aaKnown RBP35.91■■■■□ 3.34
FAM228A-201ENST00000295150 CECR2Q9BXF3 1484 aa35.78■■■■□ 3.32
FAM228A-201ENST00000295150 DNAJC5BQ9UF47 199 aa35.76■■■■□ 3.32
FAM228A-201ENST00000295150 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
FAM228A-201ENST00000295150 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
FAM228A-201ENST00000295150 SMARCA4P51532 1647 aa35.57■■■■□ 3.29
FAM228A-201ENST00000295150 MROH2BQ7Z745 1585 aa35.45■■■■□ 3.27
FAM228A-201ENST00000295150 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
FAM228A-201ENST00000295150 SMARCA2P51531 1590 aa35.27■■■■□ 3.24
FAM228A-201ENST00000295150 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
FAM228A-201ENST00000295150 RSF1Q96T23 1441 aaPredicted RBP35.21■■■■□ 3.23
FAM228A-201ENST00000295150 NCAPD3P42695 1498 aa35.21■■■■□ 3.23
FAM228A-201ENST00000295150 WIZO95785 1651 aa35.07■■■■□ 3.2
FAM228A-201ENST00000295150 HMGXB3Q12766 1538 aa35.07■■■■□ 3.2
FAM228A-201ENST00000295150 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
FAM228A-201ENST00000295150 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
FAM228A-201ENST00000295150 SUPT5HO00267 1087 aaKnown RBP34.69■■■■□ 3.14
FAM228A-201ENST00000295150 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
FAM228A-201ENST00000295150 NESP48681 1621 aa34.22■■■■□ 3.07
FAM228A-201ENST00000295150 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
FAM228A-201ENST00000295150 LAMC3Q9Y6N6 1575 aa34.2■■■■□ 3.06
FAM228A-201ENST00000295150 CFTRP13569 1480 aa34.1■■■■□ 3.05
FAM228A-201ENST00000295150 PDS5BQ9NTI5 1447 aa33.98■■■■□ 3.03
FAM228A-201ENST00000295150 ERCC6Q03468 1493 aa33.95■■■■□ 3.03
FAM228A-201ENST00000295150 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
FAM228A-201ENST00000295150 PRDM2Q13029 1718 aa33.8■■■■□ 3
FAM228A-201ENST00000295150 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
FAM228A-201ENST00000295150 CEP164Q9UPV0 1460 aa33.74■■■□□ 2.99
FAM228A-201ENST00000295150 THOC2Q8NI27 1593 aaKnown RBP33.59■■■□□ 2.97
FAM228A-201ENST00000295150 MRC2Q9UBG0 1479 aa33.59■■■□□ 2.97
FAM228A-201ENST00000295150 WDR62O43379 1518 aa33.45■■■□□ 2.95
FAM228A-201ENST00000295150 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
FAM228A-201ENST00000295150 CUX2O14529 1486 aa33.41■■■□□ 2.94
FAM228A-201ENST00000295150 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
FAM228A-201ENST00000295150 TOPBP1Q92547 1522 aa33.32■■■□□ 2.92
FAM228A-201ENST00000295150 DNMBPQ6XZF7 1577 aa33.31■■■□□ 2.92
FAM228A-201ENST00000295150 CUX1P39880 1505 aa33.23■■■□□ 2.91
FAM228A-201ENST00000295150 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.91
FAM228A-201ENST00000295150 POLA1P09884 1462 aaPredicted RBP33.08■■■□□ 2.89
FAM228A-201ENST00000295150 SYNJ1O43426 1573 aa33.07■■■□□ 2.88
FAM228A-201ENST00000295150 FGD5Q6ZNL6 1462 aa33.06■■■□□ 2.88
FAM228A-201ENST00000295150 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
FAM228A-201ENST00000295150 BIVM-ERCC5R4GMW8 1640 aa33.03■■■□□ 2.88
FAM228A-201ENST00000295150 IFT140Q96RY7 1462 aa33.01■■■□□ 2.87
FAM228A-201ENST00000295150 SOGA1O94964 1423 aa32.95■■■□□ 2.87
FAM228A-201ENST00000295150 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
FAM228A-201ENST00000295150 TARBP1Q13395 1621 aaKnown RBP32.9■■■□□ 2.86
FAM228A-201ENST00000295150 ZNF608Q9ULD9 1512 aaPredicted RBP32.82■■■□□ 2.84
FAM228A-201ENST00000295150 ABCA10Q8WWZ4 1543 aa32.75■■■□□ 2.83
FAM228A-201ENST00000295150 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
FAM228A-201ENST00000295150 TDRD9Q8NDG6 1382 aaKnown RBP32.72■■■□□ 2.83
FAM228A-201ENST00000295150 WDR97A6NE52 1622 aa32.72■■■□□ 2.83
FAM228A-201ENST00000295150 AQRO60306 1485 aaKnown RBP eCLIP32.7■■■□□ 2.83
FAM228A-201ENST00000295150 EIF4G3O43432 1585 aaKnown RBP32.7■■■□□ 2.82
FAM228A-201ENST00000295150 CHIC1Q5VXU3 224 aa32.61■■■□□ 2.81
FAM228A-201ENST00000295150 GAPVD1Q14C86 1478 aa32.58■■■□□ 2.81
FAM228A-201ENST00000295150 ABCA5Q8WWZ7 1642 aa32.56■■■□□ 2.8
FAM228A-201ENST00000295150 GRIN2BQ13224 1484 aa32.51■■■□□ 2.8
FAM228A-201ENST00000295150 KIF27Q86VH2 1401 aa32.48■■■□□ 2.79
FAM228A-201ENST00000295150 PBRM1Q86U86 1689 aa32.43■■■□□ 2.78
FAM228A-201ENST00000295150 SNAPC4Q5SXM2 1469 aa32.41■■■□□ 2.78
FAM228A-201ENST00000295150 MAGI1Q96QZ7 1491 aaPredicted RBP32.37■■■□□ 2.77
FAM228A-201ENST00000295150 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
FAM228A-201ENST00000295150 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
FAM228A-201ENST00000295150 IGF1RP08069 1367 aa32.28■■■□□ 2.76
FAM228A-201ENST00000295150 FBLN2P98095 1184 aa32.25■■■□□ 2.75
FAM228A-201ENST00000295150 SYNJ2O15056 1496 aa32.24■■■□□ 2.75
FAM228A-201ENST00000295150 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
FAM228A-201ENST00000295150 CHMP7Q8WUX9 453 aaPredicted RBP32.22■■■□□ 2.75
FAM228A-201ENST00000295150 FHAD1B1AJZ9 1412 aa32.22■■■□□ 2.75
FAM228A-201ENST00000295150 CHD1O14646 1710 aa32.17■■■□□ 2.74
FAM228A-201ENST00000295150 CUL7Q14999 1698 aa32.14■■■□□ 2.74
FAM228A-201ENST00000295150 EEA1Q15075 1411 aa32.13■■■□□ 2.73
FAM228A-201ENST00000295150 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
FAM228A-201ENST00000295150 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
FAM228A-201ENST00000295150 GRIN2AQ12879 1464 aa32.09■■■□□ 2.73
FAM228A-201ENST00000295150 FAM9AQ8IZU1 332 aaPredicted RBP32.05■■■□□ 2.72
FAM228A-201ENST00000295150 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
FAM228A-201ENST00000295150 RAPGEF2Q9Y4G8 1499 aa31.96■■■□□ 2.71
FAM228A-201ENST00000295150 PRXQ9BXM0 1461 aa31.95■■■□□ 2.71
FAM228A-201ENST00000295150 NUP160Q12769 1436 aa31.93■■■□□ 2.7
FAM228A-201ENST00000295150 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
FAM228A-201ENST00000295150 DNAJC5Q9H3Z4 198 aa31.87■■■□□ 2.69
FAM228A-201ENST00000295150 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
FAM228A-201ENST00000295150 KIF21BO75037 1637 aa31.74■■■□□ 2.67
FAM228A-201ENST00000295150 KIAA0586Q9BVV6 1533 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms