RNA–Protein interactions for RNA: ENST00000596362.1

CALM3-208, Transcript of calmodulin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CALM3, Length 1,203 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-208ENST00000596362 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
CALM3-208ENST00000596362 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
CALM3-208ENST00000596362 ABCC9O60706 1549 aa41.57■■■■■ 4.25
CALM3-208ENST00000596362 RB1CC1Q8TDY2 1594 aa39.62■■■■□ 3.93
CALM3-208ENST00000596362 DCAF8L2P0C7V8 631 aa39.43■■■■□ 3.9
CALM3-208ENST00000596362 NACADO15069 1562 aa39.38■■■■□ 3.9
CALM3-208ENST00000596362 MYO15BQ96JP2 1530 aa38.85■■■■□ 3.81
CALM3-208ENST00000596362 PABPN1Q86U42 306 aaKnown RBP eCLIP38.76■■■■□ 3.8
CALM3-208ENST00000596362 UNC13AQ9UPW8 1703 aa38.74■■■■□ 3.79
CALM3-208ENST00000596362 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
CALM3-208ENST00000596362 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
CALM3-208ENST00000596362 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
CALM3-208ENST00000596362 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
CALM3-208ENST00000596362 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
CALM3-208ENST00000596362 SHROOM4Q9ULL8 1493 aa37.87■■■■□ 3.65
CALM3-208ENST00000596362 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.6
CALM3-208ENST00000596362 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
CALM3-208ENST00000596362 CECR2Q9BXF3 1484 aa37.38■■■■□ 3.57
CALM3-208ENST00000596362 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
CALM3-208ENST00000596362 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
CALM3-208ENST00000596362 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
CALM3-208ENST00000596362 SMARCA2P51531 1590 aa36.22■■■■□ 3.39
CALM3-208ENST00000596362 BAZ1AQ9NRL2 1556 aaPredicted RBP36.2■■■■□ 3.39
CALM3-208ENST00000596362 HMGXB3Q12766 1538 aa36.1■■■■□ 3.37
CALM3-208ENST00000596362 BAZ1BQ9UIG0 1483 aaKnown RBP36■■■■□ 3.35
CALM3-208ENST00000596362 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
CALM3-208ENST00000596362 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
CALM3-208ENST00000596362 ERCC6Q03468 1493 aa35.88■■■■□ 3.33
CALM3-208ENST00000596362 NESP48681 1621 aa35.77■■■■□ 3.32
CALM3-208ENST00000596362 CUX2O14529 1486 aa35.62■■■■□ 3.29
CALM3-208ENST00000596362 WIZO95785 1651 aa35.59■■■■□ 3.29
CALM3-208ENST00000596362 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.27
CALM3-208ENST00000596362 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
CALM3-208ENST00000596362 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
CALM3-208ENST00000596362 THOC2Q8NI27 1593 aaKnown RBP35.31■■■■□ 3.24
CALM3-208ENST00000596362 PDS5BQ9NTI5 1447 aa35.31■■■■□ 3.24
CALM3-208ENST00000596362 DNAJC5Q9H3Z4 198 aa35.3■■■■□ 3.24
CALM3-208ENST00000596362 CADPSQ9ULU8 1353 aa35.27■■■■□ 3.24
CALM3-208ENST00000596362 TOP2AP11388 1531 aaKnown RBP35.12■■■■□ 3.21
CALM3-208ENST00000596362 MRC2Q9UBG0 1479 aa34.99■■■■□ 3.19
CALM3-208ENST00000596362 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
CALM3-208ENST00000596362 CFTRP13569 1480 aa34.92■■■■□ 3.18
CALM3-208ENST00000596362 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
CALM3-208ENST00000596362 WDR62O43379 1518 aa34.87■■■■□ 3.17
CALM3-208ENST00000596362 CCDC88BA6NC98 1476 aa34.74■■■■□ 3.15
CALM3-208ENST00000596362 PRDM2Q13029 1718 aa34.63■■■■□ 3.13
CALM3-208ENST00000596362 URB2Q14146 1524 aaKnown RBP34.6■■■■□ 3.13
CALM3-208ENST00000596362 TOPBP1Q92547 1522 aa34.28■■■■□ 3.08
CALM3-208ENST00000596362 IFT140Q96RY7 1462 aa34.2■■■■□ 3.06
CALM3-208ENST00000596362 ABCC8Q09428 1581 aa34.18■■■■□ 3.06
CALM3-208ENST00000596362 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
CALM3-208ENST00000596362 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
CALM3-208ENST00000596362 SUPT5HO00267 1087 aaKnown RBP34.11■■■■□ 3.05
CALM3-208ENST00000596362 OSCARQ8IYS5 282 aa34.09■■■■□ 3.05
CALM3-208ENST00000596362 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
CALM3-208ENST00000596362 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
CALM3-208ENST00000596362 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.02
CALM3-208ENST00000596362 TARBP1Q13395 1621 aaKnown RBP33.93■■■■□ 3.02
CALM3-208ENST00000596362 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.012e-10■■□□□ 12.3
CALM3-208ENST00000596362 RAD54L2Q9Y4B4 1467 aa33.85■■■■□ 3.01
CALM3-208ENST00000596362 SOGA1O94964 1423 aa33.81■■■■□ 3
CALM3-208ENST00000596362 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
CALM3-208ENST00000596362 CUX1P39880 1505 aa33.79■■■■□ 3
CALM3-208ENST00000596362 TDRD9Q8NDG6 1382 aaKnown RBP33.73■■■□□ 2.99
CALM3-208ENST00000596362 FBLN2P98095 1184 aa33.69■■■□□ 2.98
CALM3-208ENST00000596362 CHD1O14646 1710 aa33.69■■■□□ 2.98
CALM3-208ENST00000596362 RIMBP3CA6NJZ7 1639 aa33.63■■■□□ 2.97
CALM3-208ENST00000596362 RIMBP3BA6NNM3 1639 aa33.63■■■□□ 2.97
CALM3-208ENST00000596362 RIMBP3Q9UFD9 1639 aa33.63■■■□□ 2.97
CALM3-208ENST00000596362 WDR97A6NE52 1622 aa33.56■■■□□ 2.96
CALM3-208ENST00000596362 SNAPC4Q5SXM2 1469 aa33.55■■■□□ 2.96
CALM3-208ENST00000596362 ARHGEF11O15085 1522 aa33.53■■■□□ 2.96
CALM3-208ENST00000596362 GRIN2BQ13224 1484 aa33.47■■■□□ 2.95
CALM3-208ENST00000596362 CHMP7Q8WUX9 453 aaPredicted RBP33.43■■■□□ 2.94
CALM3-208ENST00000596362 MAGI1Q96QZ7 1491 aaPredicted RBP33.42■■■□□ 2.94
CALM3-208ENST00000596362 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
CALM3-208ENST00000596362 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
CALM3-208ENST00000596362 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
CALM3-208ENST00000596362 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.93
CALM3-208ENST00000596362 CYB5RLQ6IPT4 315 aa33.33■■■□□ 2.93
CALM3-208ENST00000596362 SYNJ2O15056 1496 aa33.32■■■□□ 2.92
CALM3-208ENST00000596362 ABCA5Q8WWZ7 1642 aa33.32■■■□□ 2.92
CALM3-208ENST00000596362 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
CALM3-208ENST00000596362 SYNJ1O43426 1573 aa33.31■■■□□ 2.92
CALM3-208ENST00000596362 TOP2BQ02880 1626 aa33.31■■■□□ 2.92
CALM3-208ENST00000596362 CLASP1Q7Z460 1538 aa33.24■■■□□ 2.91
CALM3-208ENST00000596362 ARAP1Q96P48 1450 aa33.22■■■□□ 2.91
CALM3-208ENST00000596362 ADAMTS12P58397 1594 aa33.05■■■□□ 2.88
CALM3-208ENST00000596362 GRIN2AQ12879 1464 aa33.04■■■□□ 2.88
CALM3-208ENST00000596362 FHAD1B1AJZ9 1412 aa32.97■■■□□ 2.87
CALM3-208ENST00000596362 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
CALM3-208ENST00000596362 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
CALM3-208ENST00000596362 TRHP20396 242 aaPredicted RBP32.91■■■□□ 2.86
CALM3-208ENST00000596362 NUP160Q12769 1436 aa32.88■■■□□ 2.85
CALM3-208ENST00000596362 ERCC6L2Q5T890 1561 aa32.81■■■□□ 2.84
CALM3-208ENST00000596362 SHROOM2Q13796 1616 aa32.7■■■□□ 2.83
CALM3-208ENST00000596362 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
CALM3-208ENST00000596362 IGF1RP08069 1367 aa32.61■■■□□ 2.81
CALM3-208ENST00000596362 PRG4Q92954 1404 aaPredicted RBP32.6■■■□□ 2.81
CALM3-208ENST00000596362 JPH4Q96JJ6 628 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms