RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 NISCHQ9Y2I1 1504 aa46.01■■■■■ 4.96
HOXA9-202ENST00000396345 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
HOXA9-202ENST00000396345 ABCC9O60706 1549 aa39.6■■■■□ 3.93
HOXA9-202ENST00000396345 DCAF8L2P0C7V8 631 aa38.38■■■■□ 3.73
HOXA9-202ENST00000396345 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
HOXA9-202ENST00000396345 NACADO15069 1562 aa38.25■■■■□ 3.71
HOXA9-202ENST00000396345 RB1CC1Q8TDY2 1594 aa38.23■■■■□ 3.71
HOXA9-202ENST00000396345 MYO15BQ96JP2 1530 aa38.11■■■■□ 3.69
HOXA9-202ENST00000396345 DCAF1Q9Y4B6 1507 aa38.07■■■■□ 3.68
HOXA9-202ENST00000396345 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
HOXA9-202ENST00000396345 SCRIBQ14160 1630 aa37.24■■■■□ 3.55
HOXA9-202ENST00000396345 PABPN1Q86U42 306 aaKnown RBP eCLIP37.08■■■■□ 3.53
HOXA9-202ENST00000396345 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
HOXA9-202ENST00000396345 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
HOXA9-202ENST00000396345 DNAJC5BQ9UF47 199 aa36.56■■■■□ 3.44
HOXA9-202ENST00000396345 EIF4G1Q04637 1599 aaKnown RBP36.05■■■■□ 3.36
HOXA9-202ENST00000396345 CC2D2AQ9P2K1 1620 aa35.83■■■■□ 3.33
HOXA9-202ENST00000396345 CECR2Q9BXF3 1484 aa35.81■■■■□ 3.32
HOXA9-202ENST00000396345 SMARCA4P51532 1647 aa35.64■■■■□ 3.3
HOXA9-202ENST00000396345 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
HOXA9-202ENST00000396345 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
HOXA9-202ENST00000396345 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
HOXA9-202ENST00000396345 SMARCA2P51531 1590 aa35.34■■■■□ 3.25
HOXA9-202ENST00000396345 NCAPD3P42695 1498 aa35.29■■■■□ 3.24
HOXA9-202ENST00000396345 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
HOXA9-202ENST00000396345 RSF1Q96T23 1441 aaPredicted RBP35.18■■■■□ 3.22
HOXA9-202ENST00000396345 HMGXB3Q12766 1538 aa35.14■■■■□ 3.22
HOXA9-202ENST00000396345 WIZO95785 1651 aa35.11■■■■□ 3.21
HOXA9-202ENST00000396345 BAZ1BQ9UIG0 1483 aaKnown RBP35.1■■■■□ 3.21
HOXA9-202ENST00000396345 TOP2AP11388 1531 aaKnown RBP34.75■■■■□ 3.15
HOXA9-202ENST00000396345 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.12
HOXA9-202ENST00000396345 NESP48681 1621 aa34.36■■■■□ 3.09
HOXA9-202ENST00000396345 CCDC88BA6NC98 1476 aa34.35■■■■□ 3.09
HOXA9-202ENST00000396345 LAMC3Q9Y6N6 1575 aa34.31■■■■□ 3.08
HOXA9-202ENST00000396345 CADPSQ9ULU8 1353 aa34.29■■■■□ 3.08
HOXA9-202ENST00000396345 CFTRP13569 1480 aa34.14■■■■□ 3.06
HOXA9-202ENST00000396345 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
HOXA9-202ENST00000396345 PDS5BQ9NTI5 1447 aa34.09■■■■□ 3.05
HOXA9-202ENST00000396345 KIF21AQ7Z4S6 1674 aa33.96■■■■□ 3.03
HOXA9-202ENST00000396345 PRDM2Q13029 1718 aa33.92■■■■□ 3.02
HOXA9-202ENST00000396345 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
HOXA9-202ENST00000396345 CEP164Q9UPV0 1460 aa33.82■■■■□ 3.01
HOXA9-202ENST00000396345 THOC2Q8NI27 1593 aaKnown RBP33.75■■■□□ 2.99
HOXA9-202ENST00000396345 MRC2Q9UBG0 1479 aa33.71■■■□□ 2.99
HOXA9-202ENST00000396345 CUX2O14529 1486 aa33.64■■■□□ 2.98
HOXA9-202ENST00000396345 WDR62O43379 1518 aa33.58■■■□□ 2.97
HOXA9-202ENST00000396345 URB2Q14146 1524 aaKnown RBP33.53■■■□□ 2.96
HOXA9-202ENST00000396345 DNAJC5Q9H3Z4 198 aa33.48■■■□□ 2.95
HOXA9-202ENST00000396345 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
HOXA9-202ENST00000396345 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
HOXA9-202ENST00000396345 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
HOXA9-202ENST00000396345 CUX1P39880 1505 aa33.26■■■□□ 2.91
HOXA9-202ENST00000396345 WRNQ14191 1432 aaPredicted RBP eCLIP33.17■■■□□ 2.9
HOXA9-202ENST00000396345 POLA1P09884 1462 aaPredicted RBP33.12■■■□□ 2.89
HOXA9-202ENST00000396345 IFT140Q96RY7 1462 aa33.11■■■□□ 2.89
HOXA9-202ENST00000396345 FGD5Q6ZNL6 1462 aa33.1■■■□□ 2.89
HOXA9-202ENST00000396345 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
HOXA9-202ENST00000396345 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
HOXA9-202ENST00000396345 BIVM-ERCC5R4GMW8 1640 aa33.05■■■□□ 2.88
HOXA9-202ENST00000396345 SOGA1O94964 1423 aa33.02■■■□□ 2.88
HOXA9-202ENST00000396345 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
HOXA9-202ENST00000396345 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
HOXA9-202ENST00000396345 ZNF608Q9ULD9 1512 aaPredicted RBP32.92■■■□□ 2.86
HOXA9-202ENST00000396345 EIF4G3O43432 1585 aaKnown RBP32.8■■■□□ 2.84
HOXA9-202ENST00000396345 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.84
HOXA9-202ENST00000396345 WDR97A6NE52 1622 aa32.79■■■□□ 2.84
HOXA9-202ENST00000396345 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
HOXA9-202ENST00000396345 ABCA10Q8WWZ4 1543 aa32.78■■■□□ 2.84
HOXA9-202ENST00000396345 TRIM41Q8WV44 630 aa32.64■■■□□ 2.82
HOXA9-202ENST00000396345 GAPVD1Q14C86 1478 aa32.63■■■□□ 2.81
HOXA9-202ENST00000396345 ABCA5Q8WWZ7 1642 aa32.62■■■□□ 2.81
HOXA9-202ENST00000396345 GRIN2BQ13224 1484 aa32.58■■■□□ 2.81
HOXA9-202ENST00000396345 PBRM1Q86U86 1689 aa32.54■■■□□ 2.8
HOXA9-202ENST00000396345 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
HOXA9-202ENST00000396345 KIF27Q86VH2 1401 aa32.46■■■□□ 2.79
HOXA9-202ENST00000396345 MAGI1Q96QZ7 1491 aaPredicted RBP32.45■■■□□ 2.79
HOXA9-202ENST00000396345 CHIC1Q5VXU3 224 aa32.44■■■□□ 2.78
HOXA9-202ENST00000396345 ERICH3Q5RHP9 1530 aa32.4■■■□□ 2.78
HOXA9-202ENST00000396345 FBLN2P98095 1184 aa32.37■■■□□ 2.77
HOXA9-202ENST00000396345 CHD1O14646 1710 aa32.34■■■□□ 2.77
HOXA9-202ENST00000396345 SYNJ2O15056 1496 aa32.33■■■□□ 2.77
HOXA9-202ENST00000396345 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
HOXA9-202ENST00000396345 CHMP7Q8WUX9 453 aaPredicted RBP32.32■■■□□ 2.76
HOXA9-202ENST00000396345 ADAMTS12P58397 1594 aa32.29■■■□□ 2.76
HOXA9-202ENST00000396345 IGF1RP08069 1367 aa32.28■■■□□ 2.76
HOXA9-202ENST00000396345 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.76
HOXA9-202ENST00000396345 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.75
HOXA9-202ENST00000396345 CUL7Q14999 1698 aa32.17■■■□□ 2.74
HOXA9-202ENST00000396345 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
HOXA9-202ENST00000396345 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
HOXA9-202ENST00000396345 EEA1Q15075 1411 aa32.03■■■□□ 2.72
HOXA9-202ENST00000396345 NUP160Q12769 1436 aa31.99■■■□□ 2.71
HOXA9-202ENST00000396345 CSRNP3Q8WYN3 585 aa31.98■■■□□ 2.71
HOXA9-202ENST00000396345 CLASP1Q7Z460 1538 aa31.98■■■□□ 2.71
HOXA9-202ENST00000396345 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
HOXA9-202ENST00000396345 FAM9AQ8IZU1 332 aaPredicted RBP31.96■■■□□ 2.71
HOXA9-202ENST00000396345 RAPGEF2Q9Y4G8 1499 aa31.94■■■□□ 2.7
HOXA9-202ENST00000396345 PRXQ9BXM0 1461 aa31.89■■■□□ 2.7
HOXA9-202ENST00000396345 KIAA0586Q9BVV6 1533 aa31.78■■■□□ 2.68
HOXA9-202ENST00000396345 ARHGEF11O15085 1522 aa31.76■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms