Protein–RNA interactions for Protein: P53992

SEC24C, Protein transport protein Sec24C, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24CP53992 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC24CP53992 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEC24CP53992 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SEC24CP53992 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
SEC24CP53992 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.24■□□□□ 0.67
SEC24CP53992 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC24CP53992 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SEC24CP53992 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SEC24CP53992 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.23■□□□□ 0.67
SEC24CP53992 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 CDV3P1-201ENST00000471403 739 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 PBX2P1-201ENST00000493219 1291 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.23■□□□□ 0.67
SEC24CP53992 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L2-201ENST00000561772 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L6-201ENST00000626483 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L1-201ENST00000627662 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L8-201ENST00000629013 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L3-201ENST00000630187 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L7-201ENST00000630678 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 DUX4L5-201ENST00000630834 1275 ntBASIC19.23■□□□□ 0.67
SEC24CP53992 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.23■□□□□ 0.67
SEC24CP53992 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SEC24CP53992 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
SEC24CP53992 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.23■□□□□ 0.67
SEC24CP53992 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC24CP53992 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SEC24CP53992 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.22■□□□□ 0.67
SEC24CP53992 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 MIR638-201ENST00000385237 100 ntBASIC19.22■□□□□ 0.67
SEC24CP53992 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 AC097381.1-201ENST00000429019 1296 ntBASIC19.22■□□□□ 0.67
SEC24CP53992 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SEC24CP53992 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SEC24CP53992 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SEC24CP53992 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC24CP53992 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC24CP53992 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.22■□□□□ 0.67
SEC24CP53992 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
SEC24CP53992 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SEC24CP53992 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.21■□□□□ 0.67
SEC24CP53992 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.21■□□□□ 0.67
SEC24CP53992 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 AL136162.1-201ENST00000607711 1078 ntBASIC19.21■□□□□ 0.67
SEC24CP53992 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.21■□□□□ 0.67
SEC24CP53992 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEC24CP53992 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.21■□□□□ 0.67
SEC24CP53992 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC24CP53992 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
SEC24CP53992 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SEC24CP53992 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC24CP53992 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms