RNA–Protein interactions for RNA: ENST00000306072.9

ISG20-201, Transcript of interferon stimulated exonuclease gene 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ISG20, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISG20-201ENST00000306072 NISCHQ9Y2I1 1504 aa37.22■■■■□ 3.55
ISG20-201ENST00000306072 CCDC180Q9P1Z9 1646 aa32.47■■■□□ 2.79
ISG20-201ENST00000306072 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
ISG20-201ENST00000306072 ABCC9O60706 1549 aa31.49■■■□□ 2.63
ISG20-201ENST00000306072 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
ISG20-201ENST00000306072 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
ISG20-201ENST00000306072 DCAF1Q9Y4B6 1507 aa30.81■■■□□ 2.52
ISG20-201ENST00000306072 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
ISG20-201ENST00000306072 NACADO15069 1562 aa30.4■■■□□ 2.46
ISG20-201ENST00000306072 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
ISG20-201ENST00000306072 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
ISG20-201ENST00000306072 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
ISG20-201ENST00000306072 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
ISG20-201ENST00000306072 UNC13AQ9UPW8 1703 aa29.83■■■□□ 2.37
ISG20-201ENST00000306072 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
ISG20-201ENST00000306072 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
ISG20-201ENST00000306072 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
ISG20-201ENST00000306072 HRCP23327 699 aa29.21■■■□□ 2.27
ISG20-201ENST00000306072 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
ISG20-201ENST00000306072 LOC105371045A0A1W2PR82 267 aa28.89■■■□□ 2.22
ISG20-201ENST00000306072 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
ISG20-201ENST00000306072 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
ISG20-201ENST00000306072 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
ISG20-201ENST00000306072 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
ISG20-201ENST00000306072 TRIM26Q12899 539 aaPredicted RBP28.66■■■□□ 2.18
ISG20-201ENST00000306072 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
ISG20-201ENST00000306072 WIZO95785 1651 aa28.62■■■□□ 2.17
ISG20-201ENST00000306072 SMARCA4P51532 1647 aa28.56■■■□□ 2.16
ISG20-201ENST00000306072 DNAJC5BQ9UF47 199 aa28.44■■■□□ 2.14
ISG20-201ENST00000306072 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
ISG20-201ENST00000306072 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.13
ISG20-201ENST00000306072 ATAD2BQ9ULI0 1458 aa28.24■■■□□ 2.11
ISG20-201ENST00000306072 ZEB1P37275 1124 aaPredicted RBP28.23■■■□□ 2.11
ISG20-201ENST00000306072 PPARGC1BQ86YN6 1023 aaKnown RBP28.23■■■□□ 2.11
ISG20-201ENST00000306072 FAM9AQ8IZU1 332 aaPredicted RBP28.21■■■□□ 2.11
ISG20-201ENST00000306072 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
ISG20-201ENST00000306072 PEG3Q9GZU2 1588 aa28.14■■■□□ 2.1
ISG20-201ENST00000306072 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
ISG20-201ENST00000306072 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
ISG20-201ENST00000306072 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
ISG20-201ENST00000306072 HMGXB3Q12766 1538 aa27.95■■■□□ 2.07
ISG20-201ENST00000306072 EEA1Q15075 1411 aa27.92■■■□□ 2.06
ISG20-201ENST00000306072 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
ISG20-201ENST00000306072 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
ISG20-201ENST00000306072 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
ISG20-201ENST00000306072 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
ISG20-201ENST00000306072 CEP162Q5TB80 1403 aa27.66■■■□□ 2.02
ISG20-201ENST00000306072 SOGA1O94964 1423 aa27.65■■■□□ 2.02
ISG20-201ENST00000306072 GOLGA3Q08378 1498 aa27.57■■■□□ 2
ISG20-201ENST00000306072 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
ISG20-201ENST00000306072 KIF21BO75037 1637 aa27.48■■□□□ 1.99
ISG20-201ENST00000306072 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
ISG20-201ENST00000306072 NESP48681 1621 aa27.45■■□□□ 1.98
ISG20-201ENST00000306072 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
ISG20-201ENST00000306072 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
ISG20-201ENST00000306072 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
ISG20-201ENST00000306072 UBTFP17480 764 aaKnown RBP27.31■■□□□ 1.96
ISG20-201ENST00000306072 CCER1Q8TC90 406 aaPredicted RBP27.3■■□□□ 1.96
ISG20-201ENST00000306072 CFTRP13569 1480 aa27.28■■□□□ 1.96
ISG20-201ENST00000306072 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
ISG20-201ENST00000306072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
ISG20-201ENST00000306072 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
ISG20-201ENST00000306072 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
ISG20-201ENST00000306072 CLIP1P30622 1438 aa27.15■■□□□ 1.94
ISG20-201ENST00000306072 PRDM2Q13029 1718 aa27.14■■□□□ 1.93
ISG20-201ENST00000306072 VPS8Q8N3P4 1428 aa27.12■■□□□ 1.93
ISG20-201ENST00000306072 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
ISG20-201ENST00000306072 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
ISG20-201ENST00000306072 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
ISG20-201ENST00000306072 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
ISG20-201ENST00000306072 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
ISG20-201ENST00000306072 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
ISG20-201ENST00000306072 PRXQ9BXM0 1461 aa26.95■■□□□ 1.9
ISG20-201ENST00000306072 TTBK1Q5TCY1 1321 aaPredicted RBP26.93■■□□□ 1.9
ISG20-201ENST00000306072 CUX1P39880 1505 aa26.85■■□□□ 1.89
ISG20-201ENST00000306072 APLP2Q06481 763 aa26.83■■□□□ 1.89
ISG20-201ENST00000306072 DIEXFQ68CQ4 756 aaKnown RBP26.81■■□□□ 1.88
ISG20-201ENST00000306072 KIF27Q86VH2 1401 aa26.79■■□□□ 1.88
ISG20-201ENST00000306072 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
ISG20-201ENST00000306072 MRC2Q9UBG0 1479 aa26.76■■□□□ 1.87
ISG20-201ENST00000306072 SCAF1Q9H7N4 1312 aaKnown RBP26.76■■□□□ 1.87
ISG20-201ENST00000306072 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
ISG20-201ENST00000306072 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
ISG20-201ENST00000306072 TOPBP1Q92547 1522 aa26.7■■□□□ 1.86
ISG20-201ENST00000306072 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
ISG20-201ENST00000306072 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
ISG20-201ENST00000306072 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
ISG20-201ENST00000306072 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.85
ISG20-201ENST00000306072 WDR62O43379 1518 aa26.64■■□□□ 1.85
ISG20-201ENST00000306072 CLSPNQ9HAW4 1339 aa26.62■■□□□ 1.85
ISG20-201ENST00000306072 HNRNPUL2Q1KMD3 747 aaKnown RBP26.62■■□□□ 1.85
ISG20-201ENST00000306072 CENPBP07199 599 aaPredicted RBP26.61■■□□□ 1.85
ISG20-201ENST00000306072 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
ISG20-201ENST00000306072 RRBP1Q9P2E9 1410 aaKnown RBP26.53■■□□□ 1.84
ISG20-201ENST00000306072 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
ISG20-201ENST00000306072 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
ISG20-201ENST00000306072 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
ISG20-201ENST00000306072 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
ISG20-201ENST00000306072 CUX2O14529 1486 aa26.46■■□□□ 1.83
ISG20-201ENST00000306072 MAP3K1Q13233 1512 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms