RNA–Protein interactions for RNA: ENST00000629203.2

SH2D3C-213, Transcript of SH2 domain containing 3C, humanhuman

TSL 2 BASIC

Gene SH2D3C, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-213ENST00000629203 NISCHQ9Y2I1 1504 aa35.49■■■■□ 3.27
SH2D3C-213ENST00000629203 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
SH2D3C-213ENST00000629203 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
SH2D3C-213ENST00000629203 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
SH2D3C-213ENST00000629203 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
SH2D3C-213ENST00000629203 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
SH2D3C-213ENST00000629203 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
SH2D3C-213ENST00000629203 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
SH2D3C-213ENST00000629203 HRCP23327 699 aa29.14■■■□□ 2.25
SH2D3C-213ENST00000629203 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
SH2D3C-213ENST00000629203 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
SH2D3C-213ENST00000629203 LOC105371045A0A1W2PR82 267 aa28.58■■■□□ 2.17
SH2D3C-213ENST00000629203 ABCC9O60706 1549 aa28.48■■■□□ 2.15
SH2D3C-213ENST00000629203 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
SH2D3C-213ENST00000629203 TRIM26Q12899 539 aaPredicted RBP28.25■■■□□ 2.11
SH2D3C-213ENST00000629203 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
SH2D3C-213ENST00000629203 SCRIBQ14160 1630 aa28.2■■■□□ 2.11
SH2D3C-213ENST00000629203 RB1CC1Q8TDY2 1594 aa28.01■■■□□ 2.07
SH2D3C-213ENST00000629203 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
SH2D3C-213ENST00000629203 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
SH2D3C-213ENST00000629203 ZEB1P37275 1124 aaPredicted RBP27.77■■■□□ 2.04
SH2D3C-213ENST00000629203 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
SH2D3C-213ENST00000629203 NACADO15069 1562 aa27.65■■■□□ 2.02
SH2D3C-213ENST00000629203 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
SH2D3C-213ENST00000629203 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
SH2D3C-213ENST00000629203 WIZO95785 1651 aa27.51■■□□□ 1.99
SH2D3C-213ENST00000629203 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
SH2D3C-213ENST00000629203 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
SH2D3C-213ENST00000629203 SCAF1Q9H7N4 1312 aaKnown RBP27.07■■□□□ 1.92
SH2D3C-213ENST00000629203 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
SH2D3C-213ENST00000629203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
SH2D3C-213ENST00000629203 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
SH2D3C-213ENST00000629203 CCER1Q8TC90 406 aaPredicted RBP26.99■■□□□ 1.91
SH2D3C-213ENST00000629203 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
SH2D3C-213ENST00000629203 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
SH2D3C-213ENST00000629203 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
SH2D3C-213ENST00000629203 SMARCA2P51531 1590 aa26.94■■□□□ 1.9
SH2D3C-213ENST00000629203 PELP1Q8IZL8 1130 aaKnown RBP26.89■■□□□ 1.89
SH2D3C-213ENST00000629203 CEP162Q5TB80 1403 aa26.87■■□□□ 1.89
SH2D3C-213ENST00000629203 SOGA1O94964 1423 aa26.83■■□□□ 1.88
SH2D3C-213ENST00000629203 UNC13AQ9UPW8 1703 aa26.8■■□□□ 1.88
SH2D3C-213ENST00000629203 TNIKQ9UKE5 1360 aa26.79■■□□□ 1.88
SH2D3C-213ENST00000629203 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
SH2D3C-213ENST00000629203 EEA1Q15075 1411 aa26.72■■□□□ 1.87
SH2D3C-213ENST00000629203 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
SH2D3C-213ENST00000629203 ACIN1Q9UKV3 1341 aaKnown RBP26.69■■□□□ 1.86
SH2D3C-213ENST00000629203 RUSC2Q8N2Y8 1516 aa26.69■■□□□ 1.86
SH2D3C-213ENST00000629203 DIEXFQ68CQ4 756 aaKnown RBP26.66■■□□□ 1.86
SH2D3C-213ENST00000629203 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
SH2D3C-213ENST00000629203 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
SH2D3C-213ENST00000629203 GOLGA3Q08378 1498 aa26.58■■□□□ 1.84
SH2D3C-213ENST00000629203 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
SH2D3C-213ENST00000629203 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
SH2D3C-213ENST00000629203 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
SH2D3C-213ENST00000629203 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
SH2D3C-213ENST00000629203 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
SH2D3C-213ENST00000629203 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
SH2D3C-213ENST00000629203 ZNF316A6NFI3 1004 aaPredicted RBP26.38■■□□□ 1.81
SH2D3C-213ENST00000629203 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
SH2D3C-213ENST00000629203 KIF21BO75037 1637 aa26.37■■□□□ 1.81
SH2D3C-213ENST00000629203 CLIP1P30622 1438 aa26.29■■□□□ 1.8
SH2D3C-213ENST00000629203 HNRNPUL2Q1KMD3 747 aaKnown RBP26.24■■□□□ 1.79
SH2D3C-213ENST00000629203 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
SH2D3C-213ENST00000629203 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
SH2D3C-213ENST00000629203 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
SH2D3C-213ENST00000629203 RAPGEF2Q9Y4G8 1499 aa26.16■■□□□ 1.78
SH2D3C-213ENST00000629203 APLP2Q06481 763 aa26.08■■□□□ 1.77
SH2D3C-213ENST00000629203 MIER1Q8N108 512 aa26.06■■□□□ 1.76
SH2D3C-213ENST00000629203 YTHDC1Q96MU7 727 aaKnown RBP26.05■■□□□ 1.76
SH2D3C-213ENST00000629203 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
SH2D3C-213ENST00000629203 RANGAP1P46060 587 aaPredicted RBP25.98■■□□□ 1.75
SH2D3C-213ENST00000629203 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
SH2D3C-213ENST00000629203 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.73
SH2D3C-213ENST00000629203 PRXQ9BXM0 1461 aa25.86■■□□□ 1.73
SH2D3C-213ENST00000629203 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
SH2D3C-213ENST00000629203 CLSPNQ9HAW4 1339 aa25.82■■□□□ 1.72
SH2D3C-213ENST00000629203 DHX57Q6P158 1386 aaKnown RBP25.8■■□□□ 1.72
SH2D3C-213ENST00000629203 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
SH2D3C-213ENST00000629203 CUX1P39880 1505 aa25.69■■□□□ 1.7
SH2D3C-213ENST00000629203 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
SH2D3C-213ENST00000629203 KIF27Q86VH2 1401 aa25.64■■□□□ 1.69
SH2D3C-213ENST00000629203 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
SH2D3C-213ENST00000629203 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
SH2D3C-213ENST00000629203 MYT1Q01538 1121 aa25.59■■□□□ 1.69
SH2D3C-213ENST00000629203 CUX2O14529 1486 aa25.58■■□□□ 1.69
SH2D3C-213ENST00000629203 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
SH2D3C-213ENST00000629203 CCNB3Q8WWL7 1395 aa25.53■■□□□ 1.68
SH2D3C-213ENST00000629203 CFTRP13569 1480 aa25.5■■□□□ 1.67
SH2D3C-213ENST00000629203 ITGAEP38570 1179 aa25.4■■□□□ 1.66
SH2D3C-213ENST00000629203 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
SH2D3C-213ENST00000629203 SUPT16HQ9Y5B9 1047 aaKnown RBP25.35■■□□□ 1.65
SH2D3C-213ENST00000629203 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
SH2D3C-213ENST00000629203 IGF1RP08069 1367 aa25.34■■□□□ 1.65
SH2D3C-213ENST00000629203 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
SH2D3C-213ENST00000629203 MAPKBP1O60336 1514 aa25.33■■□□□ 1.65
SH2D3C-213ENST00000629203 MAP3K1Q13233 1512 aa25.33■■□□□ 1.64
SH2D3C-213ENST00000629203 LRRC9Q6ZRR7 1453 aa25.24■■□□□ 1.63
SH2D3C-213ENST00000629203 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
SH2D3C-213ENST00000629203 SETD5Q9C0A6 1442 aa25.23■■□□□ 1.63
SH2D3C-213ENST00000629203 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms