RNA–Protein interactions for RNA: ENST00000535291.5

MMP17-206, Transcript of matrix metallopeptidase 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP17, Length 2,301 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-206ENST00000535291 NISCHQ9Y2I1 1504 aa33.65■■■□□ 2.98
MMP17-206ENST00000535291 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
MMP17-206ENST00000535291 HRCP23327 699 aa29.2■■■□□ 2.26
MMP17-206ENST00000535291 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
MMP17-206ENST00000535291 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
MMP17-206ENST00000535291 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
MMP17-206ENST00000535291 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
MMP17-206ENST00000535291 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
MMP17-206ENST00000535291 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
MMP17-206ENST00000535291 PPARGC1BQ86YN6 1023 aaKnown RBP28.55■■■□□ 2.16
MMP17-206ENST00000535291 DCAF1Q9Y4B6 1507 aa28.24■■■□□ 2.11
MMP17-206ENST00000535291 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
MMP17-206ENST00000535291 TRIM26Q12899 539 aaPredicted RBP27.87■■■□□ 2.05
MMP17-206ENST00000535291 DCAF8L2P0C7V8 631 aa27.8■■■□□ 2.04
MMP17-206ENST00000535291 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.02
MMP17-206ENST00000535291 ZEB1P37275 1124 aaPredicted RBP27.55■■■□□ 2
MMP17-206ENST00000535291 SCAF1Q9H7N4 1312 aaKnown RBP27.45■■□□□ 1.98
MMP17-206ENST00000535291 ABCC9O60706 1549 aa27.41■■□□□ 1.98
MMP17-206ENST00000535291 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
MMP17-206ENST00000535291 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
MMP17-206ENST00000535291 FAM9AQ8IZU1 332 aaPredicted RBP26.96■■□□□ 1.91
MMP17-206ENST00000535291 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
MMP17-206ENST00000535291 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
MMP17-206ENST00000535291 NEUROD1Q13562 356 aa26.79■■□□□ 1.88
MMP17-206ENST00000535291 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
MMP17-206ENST00000535291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
MMP17-206ENST00000535291 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
MMP17-206ENST00000535291 NACADO15069 1562 aa26.66■■□□□ 1.86
MMP17-206ENST00000535291 CCER1Q8TC90 406 aaPredicted RBP26.61■■□□□ 1.85
MMP17-206ENST00000535291 GTF3C3Q9Y5Q9 886 aa26.6■■□□□ 1.85
MMP17-206ENST00000535291 DIEXFQ68CQ4 756 aaKnown RBP26.54■■□□□ 1.84
MMP17-206ENST00000535291 MYT1Q01538 1121 aa26.52■■□□□ 1.84
MMP17-206ENST00000535291 CENPBP07199 599 aaPredicted RBP26.51■■□□□ 1.84
MMP17-206ENST00000535291 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
MMP17-206ENST00000535291 MROH2BQ7Z745 1585 aa26.26■■□□□ 1.79
MMP17-206ENST00000535291 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
MMP17-206ENST00000535291 WIZO95785 1651 aa26.16■■□□□ 1.78
MMP17-206ENST00000535291 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
MMP17-206ENST00000535291 TTBK1Q5TCY1 1321 aaPredicted RBP26.12■■□□□ 1.77
MMP17-206ENST00000535291 UNC13AQ9UPW8 1703 aa26.12■■□□□ 1.77
MMP17-206ENST00000535291 ZNF316A6NFI3 1004 aaPredicted RBP26.11■■□□□ 1.77
MMP17-206ENST00000535291 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
MMP17-206ENST00000535291 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
MMP17-206ENST00000535291 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
MMP17-206ENST00000535291 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
MMP17-206ENST00000535291 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
MMP17-206ENST00000535291 MIER1Q8N108 512 aa25.9■■□□□ 1.74
MMP17-206ENST00000535291 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
MMP17-206ENST00000535291 TNIKQ9UKE5 1360 aa25.89■■□□□ 1.74
MMP17-206ENST00000535291 SOGA1O94964 1423 aa25.81■■□□□ 1.72
MMP17-206ENST00000535291 BICRAQ9NZM4 1560 aa25.79■■□□□ 1.72
MMP17-206ENST00000535291 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
MMP17-206ENST00000535291 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
MMP17-206ENST00000535291 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
MMP17-206ENST00000535291 RUSC2Q8N2Y8 1516 aa25.67■■□□□ 1.7
MMP17-206ENST00000535291 EEA1Q15075 1411 aa25.66■■□□□ 1.7
MMP17-206ENST00000535291 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
MMP17-206ENST00000535291 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
MMP17-206ENST00000535291 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
MMP17-206ENST00000535291 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
MMP17-206ENST00000535291 SUPT16HQ9Y5B9 1047 aaKnown RBP25.42■■□□□ 1.66
MMP17-206ENST00000535291 CLSPNQ9HAW4 1339 aa25.41■■□□□ 1.66
MMP17-206ENST00000535291 CLIP1P30622 1438 aa25.36■■□□□ 1.65
MMP17-206ENST00000535291 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
MMP17-206ENST00000535291 VPS8Q8N3P4 1428 aa25.34■■□□□ 1.65
MMP17-206ENST00000535291 KIF21BO75037 1637 aa25.32■■□□□ 1.64
MMP17-206ENST00000535291 TSHZ2Q9NRE2 1034 aa25.24■■□□□ 1.63
MMP17-206ENST00000535291 APLP2Q06481 763 aa25.23■■□□□ 1.63
MMP17-206ENST00000535291 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
MMP17-206ENST00000535291 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
MMP17-206ENST00000535291 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
MMP17-206ENST00000535291 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
MMP17-206ENST00000535291 ANP32EQ9BTT0 268 aa25.14■■□□□ 1.61
MMP17-206ENST00000535291 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
MMP17-206ENST00000535291 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
MMP17-206ENST00000535291 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
MMP17-206ENST00000535291 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
MMP17-206ENST00000535291 KANK4Q5T7N3 995 aaPredicted RBP24.91■■□□□ 1.58
MMP17-206ENST00000535291 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
MMP17-206ENST00000535291 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
MMP17-206ENST00000535291 BCL11AQ9H165 835 aa24.87■■□□□ 1.57
MMP17-206ENST00000535291 CUX2O14529 1486 aa24.86■■□□□ 1.57
MMP17-206ENST00000535291 BCANQ96GW7 911 aa24.84■■□□□ 1.57
MMP17-206ENST00000535291 FKBP8Q14318 412 aa24.77■■□□□ 1.56
MMP17-206ENST00000535291 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
MMP17-206ENST00000535291 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
MMP17-206ENST00000535291 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
MMP17-206ENST00000535291 CCNB3Q8WWL7 1395 aa24.73■■□□□ 1.55
MMP17-206ENST00000535291 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
MMP17-206ENST00000535291 MAPKBP1O60336 1514 aa24.69■■□□□ 1.54
MMP17-206ENST00000535291 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
MMP17-206ENST00000535291 RBM19Q9Y4C8 960 aaKnown RBP24.66■■□□□ 1.54
MMP17-206ENST00000535291 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
MMP17-206ENST00000535291 ITGAEP38570 1179 aa24.64■■□□□ 1.54
MMP17-206ENST00000535291 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.54
MMP17-206ENST00000535291 DDX10Q13206 875 aaKnown RBP24.63■■□□□ 1.53
MMP17-206ENST00000535291 HMGXB3Q12766 1538 aa24.59■■□□□ 1.53
MMP17-206ENST00000535291 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
MMP17-206ENST00000535291 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
MMP17-206ENST00000535291 NEFLP07196 543 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms