Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 NIFKP9-201ENST00000419265 221 ntBASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AC012618.2-201ENST00000428058 849 ntBASIC16.81■□□□□ 0.28
CDH20Q9HBT6 KSR1P1-201ENST00000446298 240 ntBASIC16.81■□□□□ 0.28
CDH20Q9HBT6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AF186192.3-201ENST00000583427 947 ntBASIC16.81■□□□□ 0.28
CDH20Q9HBT6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AL353708.3-201ENST00000610272 989 ntBASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AC090340.1-201ENST00000620778 4980 ntBASIC16.81■□□□□ 0.28
CDH20Q9HBT6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH20Q9HBT6 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.8■□□□□ 0.28
CDH20Q9HBT6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 RPS2P55-201ENST00000397318 883 ntBASIC16.8■□□□□ 0.28
CDH20Q9HBT6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 AC107956.1-201ENST00000494359 873 ntBASIC16.8■□□□□ 0.28
CDH20Q9HBT6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 AL158211.5-201ENST00000623583 2518 ntBASIC16.8■□□□□ 0.28
CDH20Q9HBT6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH20Q9HBT6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 ZNF815P-204ENST00000434898 1737 ntBASIC16.79■□□□□ 0.28
CDH20Q9HBT6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 AC131212.4-201ENST00000623606 975 ntBASIC16.79■□□□□ 0.28
CDH20Q9HBT6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 CR392000.1-201ENST00000624770 1228 ntBASIC16.79■□□□□ 0.28
CDH20Q9HBT6 HLA-A-209ENST00000638375 975 ntBASIC16.79■□□□□ 0.28
CDH20Q9HBT6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH20Q9HBT6 KRT16P1-201ENST00000399124 1418 ntBASIC16.79■□□□□ 0.28
CDH20Q9HBT6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms