RNA–Protein interactions for RNA: ENST00000614939.4

TPGS2-221, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 4 BASIC

Gene TPGS2, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-221ENST00000614939 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
TPGS2-221ENST00000614939 CCDC180Q9P1Z9 1646 aa40.74■■■■■ 4.11
TPGS2-221ENST00000614939 ABCC9O60706 1549 aa39.45■■■■□ 3.91
TPGS2-221ENST00000614939 ZCCHC6Q5VYS8 1495 aaKnown RBP38.5■■■■□ 3.75
TPGS2-221ENST00000614939 DCAF8L2P0C7V8 631 aa38.4■■■■□ 3.74
TPGS2-221ENST00000614939 NACADO15069 1562 aa38.15■■■■□ 3.7
TPGS2-221ENST00000614939 RB1CC1Q8TDY2 1594 aa38.1■■■■□ 3.69
TPGS2-221ENST00000614939 DCAF1Q9Y4B6 1507 aa38.08■■■■□ 3.69
TPGS2-221ENST00000614939 MYO15BQ96JP2 1530 aa38.02■■■■□ 3.68
TPGS2-221ENST00000614939 UNC13AQ9UPW8 1703 aa37.33■■■■□ 3.57
TPGS2-221ENST00000614939 SCRIBQ14160 1630 aa37.31■■■■□ 3.56
TPGS2-221ENST00000614939 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
TPGS2-221ENST00000614939 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.51
TPGS2-221ENST00000614939 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
TPGS2-221ENST00000614939 SHROOM4Q9ULL8 1493 aa36.86■■■■□ 3.49
TPGS2-221ENST00000614939 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
TPGS2-221ENST00000614939 CECR2Q9BXF3 1484 aa35.9■■■■□ 3.34
TPGS2-221ENST00000614939 CC2D2AQ9P2K1 1620 aa35.68■■■■□ 3.3
TPGS2-221ENST00000614939 SMARCA4P51532 1647 aa35.68■■■■□ 3.3
TPGS2-221ENST00000614939 BAZ1AQ9NRL2 1556 aaPredicted RBP35.68■■■■□ 3.3
TPGS2-221ENST00000614939 MROH2BQ7Z745 1585 aa35.57■■■■□ 3.28
TPGS2-221ENST00000614939 ATAD2BQ9ULI0 1458 aa35.33■■■■□ 3.25
TPGS2-221ENST00000614939 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
TPGS2-221ENST00000614939 SMARCA2P51531 1590 aa35.3■■■■□ 3.24
TPGS2-221ENST00000614939 WIZO95785 1651 aa35.25■■■■□ 3.23
TPGS2-221ENST00000614939 PEG3Q9GZU2 1588 aa35.25■■■■□ 3.23
TPGS2-221ENST00000614939 NCAPD3P42695 1498 aa35.18■■■■□ 3.22
TPGS2-221ENST00000614939 HMGXB3Q12766 1538 aa35.08■■■■□ 3.21
TPGS2-221ENST00000614939 BAZ1BQ9UIG0 1483 aaKnown RBP35.08■■■■□ 3.21
TPGS2-221ENST00000614939 SUPT5HO00267 1087 aaKnown RBP34.91■■■■□ 3.18
TPGS2-221ENST00000614939 TOP2AP11388 1531 aaKnown RBP34.85■■■■□ 3.17
TPGS2-221ENST00000614939 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.1
TPGS2-221ENST00000614939 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
TPGS2-221ENST00000614939 NESP48681 1621 aa34.3■■■■□ 3.08
TPGS2-221ENST00000614939 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
TPGS2-221ENST00000614939 LAMC3Q9Y6N6 1575 aa34.2■■■■□ 3.07
TPGS2-221ENST00000614939 CFTRP13569 1480 aa34.11■■■■□ 3.05
TPGS2-221ENST00000614939 ERCC6Q03468 1493 aa34.01■■■■□ 3.04
TPGS2-221ENST00000614939 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
TPGS2-221ENST00000614939 PDS5BQ9NTI5 1447 aa33.95■■■■□ 3.02
TPGS2-221ENST00000614939 CUX2O14529 1486 aa33.94■■■■□ 3.02
TPGS2-221ENST00000614939 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
TPGS2-221ENST00000614939 FANCD2Q9BXW9 1451 aa33.85■■■■□ 3.01
TPGS2-221ENST00000614939 CEP164Q9UPV0 1460 aa33.76■■■■□ 3
TPGS2-221ENST00000614939 THOC2Q8NI27 1593 aaKnown RBP33.64■■■□□ 2.98
TPGS2-221ENST00000614939 MRC2Q9UBG0 1479 aa33.6■■■□□ 2.97
TPGS2-221ENST00000614939 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
TPGS2-221ENST00000614939 WDR62O43379 1518 aa33.46■■■□□ 2.95
TPGS2-221ENST00000614939 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
TPGS2-221ENST00000614939 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
TPGS2-221ENST00000614939 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
TPGS2-221ENST00000614939 CUX1P39880 1505 aa33.33■■■□□ 2.93
TPGS2-221ENST00000614939 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
TPGS2-221ENST00000614939 SYNJ1O43426 1573 aa33.22■■■□□ 2.91
TPGS2-221ENST00000614939 BIVM-ERCC5R4GMW8 1640 aa33.17■■■□□ 2.9
TPGS2-221ENST00000614939 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
TPGS2-221ENST00000614939 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
TPGS2-221ENST00000614939 POLA1P09884 1462 aaPredicted RBP33.12■■■□□ 2.89
TPGS2-221ENST00000614939 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
TPGS2-221ENST00000614939 IFT140Q96RY7 1462 aa33.01■■■□□ 2.88
TPGS2-221ENST00000614939 SOGA1O94964 1423 aa33■■■□□ 2.87
TPGS2-221ENST00000614939 TARBP1Q13395 1621 aaKnown RBP32.96■■■□□ 2.87
TPGS2-221ENST00000614939 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
TPGS2-221ENST00000614939 ZNF608Q9ULD9 1512 aaPredicted RBP32.87■■■□□ 2.85
TPGS2-221ENST00000614939 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
TPGS2-221ENST00000614939 CHIC1Q5VXU3 224 aa32.84■■■□□ 2.85
TPGS2-221ENST00000614939 ABCA10Q8WWZ4 1543 aa32.8■■■□□ 2.84
TPGS2-221ENST00000614939 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
TPGS2-221ENST00000614939 EIF4G3O43432 1585 aaKnown RBP32.77■■■□□ 2.84
TPGS2-221ENST00000614939 AQRO60306 1485 aaKnown RBP eCLIP32.75■■■□□ 2.831e-6■■□□□ 12.5
TPGS2-221ENST00000614939 ABCA5Q8WWZ7 1642 aa32.66■■■□□ 2.82
TPGS2-221ENST00000614939 GAPVD1Q14C86 1478 aa32.62■■■□□ 2.81
TPGS2-221ENST00000614939 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
TPGS2-221ENST00000614939 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
TPGS2-221ENST00000614939 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
TPGS2-221ENST00000614939 OSCARQ8IYS5 282 aa32.5■■■□□ 2.79
TPGS2-221ENST00000614939 RUSC2Q8N2Y8 1516 aa32.49■■■□□ 2.79
TPGS2-221ENST00000614939 SNAPC4Q5SXM2 1469 aa32.47■■■□□ 2.79
TPGS2-221ENST00000614939 ERICH3Q5RHP9 1530 aa32.41■■■□□ 2.78
TPGS2-221ENST00000614939 MAGI1Q96QZ7 1491 aaPredicted RBP32.38■■■□□ 2.77
TPGS2-221ENST00000614939 IGF1RP08069 1367 aa32.33■■■□□ 2.77
TPGS2-221ENST00000614939 ADAMTS12P58397 1594 aa32.32■■■□□ 2.76
TPGS2-221ENST00000614939 CHD1O14646 1710 aa32.3■■■□□ 2.76
TPGS2-221ENST00000614939 FBLN2P98095 1184 aa32.29■■■□□ 2.76
TPGS2-221ENST00000614939 FAM9AQ8IZU1 332 aaPredicted RBP32.29■■■□□ 2.76
TPGS2-221ENST00000614939 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
TPGS2-221ENST00000614939 FHAD1B1AJZ9 1412 aa32.25■■■□□ 2.75
TPGS2-221ENST00000614939 CUL7Q14999 1698 aa32.24■■■□□ 2.75
TPGS2-221ENST00000614939 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
TPGS2-221ENST00000614939 EEA1Q15075 1411 aa32.23■■■□□ 2.75
TPGS2-221ENST00000614939 CARMIL1Q5VZK9 1371 aa32.19■■■□□ 2.74
TPGS2-221ENST00000614939 CSRNP3Q8WYN3 585 aa32.16■■■□□ 2.74
TPGS2-221ENST00000614939 GRIN2AQ12879 1464 aa32.13■■■□□ 2.73
TPGS2-221ENST00000614939 RAPGEF2Q9Y4G8 1499 aa32.04■■■□□ 2.72
TPGS2-221ENST00000614939 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
TPGS2-221ENST00000614939 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
TPGS2-221ENST00000614939 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
TPGS2-221ENST00000614939 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
TPGS2-221ENST00000614939 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
TPGS2-221ENST00000614939 NUP160Q12769 1436 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms