RNA–Protein interactions for RNA: ENST00000419265.1

NIFKP9-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 9, humanhuman

BASIC

Gene NIFKP9, Length 221 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP9-201ENST00000419265 NISCHQ9Y2I1 1504 aa47.31■■■■■ 5.16
NIFKP9-201ENST00000419265 CCDC180Q9P1Z9 1646 aa42.14■■■■■ 4.34
NIFKP9-201ENST00000419265 ABCC9O60706 1549 aa41.01■■■■■ 4.16
NIFKP9-201ENST00000419265 RB1CC1Q8TDY2 1594 aa39.57■■■■□ 3.92
NIFKP9-201ENST00000419265 NACADO15069 1562 aa39.55■■■■□ 3.92
NIFKP9-201ENST00000419265 ZCCHC6Q5VYS8 1495 aaKnown RBP39.45■■■■□ 3.91
NIFKP9-201ENST00000419265 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
NIFKP9-201ENST00000419265 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
NIFKP9-201ENST00000419265 DCAF1Q9Y4B6 1507 aa39.2■■■■□ 3.87
NIFKP9-201ENST00000419265 UNC13AQ9UPW8 1703 aa38.74■■■■□ 3.79
NIFKP9-201ENST00000419265 SCRIBQ14160 1630 aa38.37■■■■□ 3.73
NIFKP9-201ENST00000419265 BICRAQ9NZM4 1560 aa38.36■■■■□ 3.73
NIFKP9-201ENST00000419265 PABPN1Q86U42 306 aaKnown RBP eCLIP38.25■■■■□ 3.71
NIFKP9-201ENST00000419265 SHROOM4Q9ULL8 1493 aa38.02■■■■□ 3.68
NIFKP9-201ENST00000419265 DNAJC5BQ9UF47 199 aa37.49■■■■□ 3.59
NIFKP9-201ENST00000419265 EIF4G1Q04637 1599 aaKnown RBP37.34■■■■□ 3.57
NIFKP9-201ENST00000419265 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
NIFKP9-201ENST00000419265 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
NIFKP9-201ENST00000419265 SMARCA4P51532 1647 aa36.74■■■■□ 3.47
NIFKP9-201ENST00000419265 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.46
NIFKP9-201ENST00000419265 SMARCA2P51531 1590 aa36.47■■■■□ 3.43
NIFKP9-201ENST00000419265 ATAD2BQ9ULI0 1458 aa36.46■■■■□ 3.43
NIFKP9-201ENST00000419265 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
NIFKP9-201ENST00000419265 NCAPD3P42695 1498 aa36.43■■■■□ 3.42
NIFKP9-201ENST00000419265 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
NIFKP9-201ENST00000419265 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
NIFKP9-201ENST00000419265 BAZ1BQ9UIG0 1483 aaKnown RBP36.18■■■■□ 3.38
NIFKP9-201ENST00000419265 WIZO95785 1651 aa36.09■■■■□ 3.37
NIFKP9-201ENST00000419265 RSF1Q96T23 1441 aaPredicted RBP36.03■■■■□ 3.36
NIFKP9-201ENST00000419265 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
NIFKP9-201ENST00000419265 LAMC3Q9Y6N6 1575 aa35.52■■■■□ 3.28
NIFKP9-201ENST00000419265 NESP48681 1621 aa35.51■■■■□ 3.28
NIFKP9-201ENST00000419265 ERCC6Q03468 1493 aa35.36■■■■□ 3.25
NIFKP9-201ENST00000419265 CADPSQ9ULU8 1353 aa35.35■■■■□ 3.25
NIFKP9-201ENST00000419265 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
NIFKP9-201ENST00000419265 PDS5BQ9NTI5 1447 aa35.22■■■■□ 3.23
NIFKP9-201ENST00000419265 KIF21AQ7Z4S6 1674 aa35.2■■■■□ 3.23
NIFKP9-201ENST00000419265 CFTRP13569 1480 aa35.19■■■■□ 3.22
NIFKP9-201ENST00000419265 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
NIFKP9-201ENST00000419265 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
NIFKP9-201ENST00000419265 THOC2Q8NI27 1593 aaKnown RBP35.06■■■■□ 3.2
NIFKP9-201ENST00000419265 CUX2O14529 1486 aa35.01■■■■□ 3.19
NIFKP9-201ENST00000419265 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
NIFKP9-201ENST00000419265 CEP164Q9UPV0 1460 aa34.95■■■■□ 3.19
NIFKP9-201ENST00000419265 MRC2Q9UBG0 1479 aa34.88■■■■□ 3.17
NIFKP9-201ENST00000419265 WDR62O43379 1518 aa34.79■■■■□ 3.16
NIFKP9-201ENST00000419265 URB2Q14146 1524 aaKnown RBP34.62■■■■□ 3.13
NIFKP9-201ENST00000419265 ABCC8Q09428 1581 aa34.45■■■■□ 3.11
NIFKP9-201ENST00000419265 DNMBPQ6XZF7 1577 aa34.44■■■■□ 3.1
NIFKP9-201ENST00000419265 TOPBP1Q92547 1522 aa34.43■■■■□ 3.1
NIFKP9-201ENST00000419265 CUX1P39880 1505 aa34.2■■■■□ 3.07
NIFKP9-201ENST00000419265 IFT140Q96RY7 1462 aa34.2■■■■□ 3.06
NIFKP9-201ENST00000419265 POLA1P09884 1462 aaPredicted RBP34.14■■■■□ 3.06
NIFKP9-201ENST00000419265 TARBP1Q13395 1621 aaKnown RBP34.09■■■■□ 3.05
NIFKP9-201ENST00000419265 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.04
NIFKP9-201ENST00000419265 ZNF608Q9ULD9 1512 aaPredicted RBP34.01■■■■□ 3.04
NIFKP9-201ENST00000419265 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
NIFKP9-201ENST00000419265 BIVM-ERCC5R4GMW8 1640 aa33.99■■■■□ 3.03
NIFKP9-201ENST00000419265 TOP2BQ02880 1626 aa33.97■■■■□ 3.03
NIFKP9-201ENST00000419265 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
NIFKP9-201ENST00000419265 SOGA1O94964 1423 aa33.96■■■■□ 3.03
NIFKP9-201ENST00000419265 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.02
NIFKP9-201ENST00000419265 SYNJ1O43426 1573 aa33.94■■■■□ 3.02
NIFKP9-201ENST00000419265 WDR97A6NE52 1622 aa33.88■■■■□ 3.01
NIFKP9-201ENST00000419265 AQRO60306 1485 aaKnown RBP eCLIP33.8■■■■□ 3
NIFKP9-201ENST00000419265 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
NIFKP9-201ENST00000419265 DNAJC5Q9H3Z4 198 aa33.75■■■□□ 2.99
NIFKP9-201ENST00000419265 TDRD9Q8NDG6 1382 aaKnown RBP33.73■■■□□ 2.99
NIFKP9-201ENST00000419265 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
NIFKP9-201ENST00000419265 PBRM1Q86U86 1689 aa33.62■■■□□ 2.97
NIFKP9-201ENST00000419265 GRIN2BQ13224 1484 aa33.6■■■□□ 2.97
NIFKP9-201ENST00000419265 GAPVD1Q14C86 1478 aa33.6■■■□□ 2.97
NIFKP9-201ENST00000419265 SNAPC4Q5SXM2 1469 aa33.54■■■□□ 2.96
NIFKP9-201ENST00000419265 CHD1O14646 1710 aa33.53■■■□□ 2.96
NIFKP9-201ENST00000419265 MAGI1Q96QZ7 1491 aaPredicted RBP33.53■■■□□ 2.96
NIFKP9-201ENST00000419265 OSCARQ8IYS5 282 aa33.47■■■□□ 2.95
NIFKP9-201ENST00000419265 SYNJ2O15056 1496 aa33.38■■■□□ 2.93
NIFKP9-201ENST00000419265 ERICH3Q5RHP9 1530 aa33.38■■■□□ 2.93
NIFKP9-201ENST00000419265 ADAMTS12P58397 1594 aa33.33■■■□□ 2.93
NIFKP9-201ENST00000419265 FBLN2P98095 1184 aa33.32■■■□□ 2.92
NIFKP9-201ENST00000419265 CHMP7Q8WUX9 453 aaPredicted RBP33.27■■■□□ 2.92
NIFKP9-201ENST00000419265 KIF27Q86VH2 1401 aa33.27■■■□□ 2.92
NIFKP9-201ENST00000419265 FHAD1B1AJZ9 1412 aa33.21■■■□□ 2.91
NIFKP9-201ENST00000419265 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
NIFKP9-201ENST00000419265 TRIM41Q8WV44 630 aa33.15■■■□□ 2.9
NIFKP9-201ENST00000419265 CLASP1Q7Z460 1538 aa33.14■■■□□ 2.9
NIFKP9-201ENST00000419265 CUL7Q14999 1698 aa33.13■■■□□ 2.89
NIFKP9-201ENST00000419265 IGF1RP08069 1367 aa33.09■■■□□ 2.89
NIFKP9-201ENST00000419265 RIMBP3CA6NJZ7 1639 aa33.03■■■□□ 2.88
NIFKP9-201ENST00000419265 RIMBP3BA6NNM3 1639 aa33.03■■■□□ 2.88
NIFKP9-201ENST00000419265 RIMBP3Q9UFD9 1639 aa33.03■■■□□ 2.88
NIFKP9-201ENST00000419265 NUP160Q12769 1436 aa33.02■■■□□ 2.88
NIFKP9-201ENST00000419265 CEP170Q5SW79 1584 aa33.02■■■□□ 2.88
NIFKP9-201ENST00000419265 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
NIFKP9-201ENST00000419265 RUSC2Q8N2Y8 1516 aa32.95■■■□□ 2.87
NIFKP9-201ENST00000419265 CARMIL1Q5VZK9 1371 aa32.9■■■□□ 2.86
NIFKP9-201ENST00000419265 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
NIFKP9-201ENST00000419265 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
NIFKP9-201ENST00000419265 RAPGEF2Q9Y4G8 1499 aa32.75■■■□□ 2.83
NIFKP9-201ENST00000419265 ARAP1Q96P48 1450 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms