RNA–Protein interactions for RNA: ENST00000263620.7

ARID3A-201, Transcript of AT-rich interaction domain 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARID3A, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3A-201ENST00000263620 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
ARID3A-201ENST00000263620 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
ARID3A-201ENST00000263620 SUPT5HO00267 1087 aaKnown RBP29.12■■■□□ 2.25
ARID3A-201ENST00000263620 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
ARID3A-201ENST00000263620 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
ARID3A-201ENST00000263620 APLP2Q06481 763 aa28.01■■■□□ 2.07
ARID3A-201ENST00000263620 PELP1Q8IZL8 1130 aaKnown RBP27.85■■■□□ 2.05
ARID3A-201ENST00000263620 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
ARID3A-201ENST00000263620 TTBK1Q5TCY1 1321 aaPredicted RBP27.23■■□□□ 1.95
ARID3A-201ENST00000263620 TRIM41Q8WV44 630 aa27.08■■□□□ 1.92
ARID3A-201ENST00000263620 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
ARID3A-201ENST00000263620 PCGF6Q9BYE7 350 aa27.03■■□□□ 1.92
ARID3A-201ENST00000263620 ATP1B4Q9UN42 357 aaPredicted RBP26.97■■□□□ 1.91
ARID3A-201ENST00000263620 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
ARID3A-201ENST00000263620 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
ARID3A-201ENST00000263620 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
ARID3A-201ENST00000263620 CENPBP07199 599 aaPredicted RBP26.75■■□□□ 1.87
ARID3A-201ENST00000263620 ERICH6Q7L0X2 663 aa26.6■■□□□ 1.85
ARID3A-201ENST00000263620 NEFLP07196 543 aa26.32■■□□□ 1.8
ARID3A-201ENST00000263620 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
ARID3A-201ENST00000263620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.08■■□□□ 1.77
ARID3A-201ENST00000263620 HNRNPUL2Q1KMD3 747 aaKnown RBP26.08■■□□□ 1.77
ARID3A-201ENST00000263620 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
ARID3A-201ENST00000263620 YTHDC1Q96MU7 727 aaKnown RBP26.07■■□□□ 1.76
ARID3A-201ENST00000263620 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
ARID3A-201ENST00000263620 ITGAEP38570 1179 aa25.91■■□□□ 1.74
ARID3A-201ENST00000263620 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
ARID3A-201ENST00000263620 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
ARID3A-201ENST00000263620 DAXXQ9UER7 740 aaPredicted RBP25.61■■□□□ 1.69
ARID3A-201ENST00000263620 LOC105371045A0A1W2PR82 267 aa25.6■■□□□ 1.69
ARID3A-201ENST00000263620 HRCP23327 699 aa25.54■■□□□ 1.68
ARID3A-201ENST00000263620 MYT1Q01538 1121 aa25.49■■□□□ 1.67
ARID3A-201ENST00000263620 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
ARID3A-201ENST00000263620 ABCC9O60706 1549 aa25.4■■□□□ 1.66
ARID3A-201ENST00000263620 CNGB1Q14028 1251 aaPredicted RBP25.4■■□□□ 1.66
ARID3A-201ENST00000263620 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.652e-7■■□□□ 14.1
ARID3A-201ENST00000263620 FAM50AQ14320 339 aaKnown RBP25.33■■□□□ 1.65
ARID3A-201ENST00000263620 TRIM52Q96A61 297 aa25.24■■□□□ 1.63
ARID3A-201ENST00000263620 CLSPNQ9HAW4 1339 aa25.07■■□□□ 1.6
ARID3A-201ENST00000263620 DIEXFQ68CQ4 756 aaKnown RBP25.06■■□□□ 1.6
ARID3A-201ENST00000263620 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
ARID3A-201ENST00000263620 FBLN2P98095 1184 aa25.01■■□□□ 1.59
ARID3A-201ENST00000263620 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
ARID3A-201ENST00000263620 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.57
ARID3A-201ENST00000263620 RTL5Q5HYW3 569 aaPredicted RBP24.86■■□□□ 1.57
ARID3A-201ENST00000263620 ANP32CO43423 234 aa24.83■■□□□ 1.57
ARID3A-201ENST00000263620 ZBTB47Q9UFB7 747 aaPredicted RBP24.76■■□□□ 1.55
ARID3A-201ENST00000263620 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
ARID3A-201ENST00000263620 BCANQ96GW7 911 aa24.66■■□□□ 1.54
ARID3A-201ENST00000263620 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
ARID3A-201ENST00000263620 NEFMP07197 916 aa24.64■■□□□ 1.54
ARID3A-201ENST00000263620 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
ARID3A-201ENST00000263620 ARID3CA6NKF2 412 aa24.6■■□□□ 1.53
ARID3A-201ENST00000263620 CANXP27824 592 aaKnown RBP24.57■■□□□ 1.52
ARID3A-201ENST00000263620 ZNF777Q9ULD5 760 aaPredicted RBP24.56■■□□□ 1.52
ARID3A-201ENST00000263620 SLC24A1O60721 1099 aa24.56■■□□□ 1.52
ARID3A-201ENST00000263620 ESF1Q9H501 851 aaKnown RBP24.47■■□□□ 1.51
ARID3A-201ENST00000263620 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
ARID3A-201ENST00000263620 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
ARID3A-201ENST00000263620 NPM1P06748 294 aaKnown RBP eCLIP24.34■■□□□ 1.49
ARID3A-201ENST00000263620 BCL11AQ9H165 835 aa24.3■■□□□ 1.48
ARID3A-201ENST00000263620 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
ARID3A-201ENST00000263620 TONSLQ96HA7 1378 aa24.26■■□□□ 1.47
ARID3A-201ENST00000263620 CHGAP10645 457 aaKnown RBP24.25■■□□□ 1.47
ARID3A-201ENST00000263620 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
ARID3A-201ENST00000263620 ANP32AP39687 249 aaKnown RBP24.13■■□□□ 1.45
ARID3A-201ENST00000263620 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
ARID3A-201ENST00000263620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.02■■□□□ 1.435e-7■□□□□ 10.5
ARID3A-201ENST00000263620 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
ARID3A-201ENST00000263620 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
ARID3A-201ENST00000263620 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
ARID3A-201ENST00000263620 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
ARID3A-201ENST00000263620 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
ARID3A-201ENST00000263620 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
ARID3A-201ENST00000263620 NPM2Q86SE8 214 aaKnown RBP23.94■■□□□ 1.42
ARID3A-201ENST00000263620 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
ARID3A-201ENST00000263620 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
ARID3A-201ENST00000263620 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
ARID3A-201ENST00000263620 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
ARID3A-201ENST00000263620 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
ARID3A-201ENST00000263620 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
ARID3A-201ENST00000263620 HSP90AA1P07900 732 aaKnown RBP23.88■■□□□ 1.41
ARID3A-201ENST00000263620 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
ARID3A-201ENST00000263620 FKBP8Q14318 412 aa23.86■■□□□ 1.41
ARID3A-201ENST00000263620 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.86■■□□□ 1.41
ARID3A-201ENST00000263620 WDR43Q15061 677 aaKnown RBP eCLIP23.85■■□□□ 1.411e-7■□□□□ 9.1
ARID3A-201ENST00000263620 ANP32BQ92688 251 aaKnown RBP23.83■■□□□ 1.41
ARID3A-201ENST00000263620 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
ARID3A-201ENST00000263620 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
ARID3A-201ENST00000263620 SALL2Q9Y467 1007 aaPredicted RBP23.78■■□□□ 1.4
ARID3A-201ENST00000263620 CLIP1P30622 1438 aa23.77■■□□□ 1.4
ARID3A-201ENST00000263620 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
ARID3A-201ENST00000263620 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
ARID3A-201ENST00000263620 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
ARID3A-201ENST00000263620 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
ARID3A-201ENST00000263620 EEA1Q15075 1411 aa23.68■■□□□ 1.38
ARID3A-201ENST00000263620 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
ARID3A-201ENST00000263620 PPP1R15AO75807 674 aaPredicted RBP23.65■■□□□ 1.38
ARID3A-201ENST00000263620 EIF4G2P78344 907 aaKnown RBP eCLIP23.64■■□□□ 1.375e-7■■■■■ 33.2
ARID3A-201ENST00000263620 KCNH8Q96L42 1107 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms