Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 GUK1-230ENST00000485838 774 ntTSL 314.53□□□□□ -0.087e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.46□□□□□ -0.097e-9■□□□□ 9.9
EXOSC5Q9NQT4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.166e-8■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.267e-9■□□□□ 9.9
EXOSC5Q9NQT4 SLC20A2-214ENST00000524237 545 ntTSL 412.77□□□□□ -0.372e-6■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-238ENST00000498092 865 ntTSL 512.61□□□□□ -0.397e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-214ENST00000460224 639 ntTSL 512.24□□□□□ -0.457e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.14□□□□□ -0.477e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-226ENST00000484953 273 ntTSL 211.72□□□□□ -0.537e-9■□□□□ 9.9
EXOSC5Q9NQT4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.542e-6■□□□□ 9.9
EXOSC5Q9NQT4 MFN2-204ENST00000484391 294 ntTSL 311.6□□□□□ -0.556e-8■□□□□ 9.9
EXOSC5Q9NQT4 MFN2-206ENST00000497302 645 ntTSL 211.58□□□□□ -0.566e-8■□□□□ 9.9
EXOSC5Q9NQT4 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.592e-6■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-233ENST00000491613 959 ntTSL 311.03□□□□□ -0.647e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-211ENST00000412265 1012 ntTSL 511□□□□□ -0.657e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-229ENST00000485733 345 ntTSL 310.85□□□□□ -0.677e-9■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-221ENST00000472939 314 ntTSL 310.41□□□□□ -0.747e-9■□□□□ 9.9
EXOSC5Q9NQT4 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.756e-8■□□□□ 9.9
EXOSC5Q9NQT4 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.756e-8■□□□□ 9.9
EXOSC5Q9NQT4 FLVCR2-205ENST00000554496 441 ntTSL 39.98□□□□□ -0.816e-8■□□□□ 9.9
EXOSC5Q9NQT4 GUK1-212ENST00000435153 865 ntTSL 39.84□□□□□ -0.837e-9■□□□□ 9.9
EXOSC5Q9NQT4 FLVCR2-209ENST00000555385 218 ntTSL 47.91□□□□□ -1.146e-8■□□□□ 9.9
EXOSC5Q9NQT4 MFN2-205ENST00000490079 445 ntTSL 27.46□□□□□ -1.226e-8■□□□□ 9.9
EXOSC5Q9NQT4 SLC20A2-203ENST00000518384 557 ntTSL 46.25□□□□□ -1.412e-6■□□□□ 9.9
EXOSC5Q9NQT4 RAPGEF2-206ENST00000505478 838 ntTSL 54.3□□□□□ -1.722e-6■□□□□ 9.9
EXOSC5Q9NQT4 MFN2-202ENST00000412236 489 ntTSL 34.09□□□□□ -1.756e-8■□□□□ 9.9
EXOSC5Q9NQT4 RNA5SP387-201ENST00000364226 106 ntBASIC3.74□□□□□ -1.816e-8■□□□□ 9.9
EXOSC5Q9NQT4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.41■■□□□ 1.021e-7■□□□□ 9.9
EXOSC5Q9NQT4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.361e-7■□□□□ 9.9
EXOSC5Q9NQT4 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC9.39□□□□□ -0.911e-7■□□□□ 9.9
EXOSC5Q9NQT4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.072e-6■□□□□ 9.9
EXOSC5Q9NQT4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.12e-6■□□□□ 9.9
EXOSC5Q9NQT4 SND1-203ENST00000463020 793 ntTSL 212.62□□□□□ -0.392e-6■□□□□ 9.9
EXOSC5Q9NQT4 SIK3-211ENST00000485363 764 ntTSL 1 (best)12.28□□□□□ -0.442e-6■□□□□ 9.9
EXOSC5Q9NQT4 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 511.9□□□□□ -0.52e-6■□□□□ 9.9
EXOSC5Q9NQT4 SIK3-203ENST00000415541 3816 ntTSL 1 (best)6.96□□□□□ -1.292e-6■□□□□ 9.9
EXOSC5Q9NQT4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.288e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-209ENST00000535641 2627 ntTSL 210.48□□□□□ -0.738e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-205ENST00000534976 3165 ntTSL 58.87□□□□□ -0.998e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC7.77□□□□□ -1.178e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-219ENST00000544314 1508 ntTSL 27.7□□□□□ -1.188e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.61□□□□□ -1.198e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-214ENST00000539079 1715 ntTSL 1 (best)7.37□□□□□ -1.238e-8■□□□□ 9.8
EXOSC5Q9NQT4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.61□□□□□ -1.358e-8■□□□□ 9.8
EXOSC5Q9NQT4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.72□□□□□ -0.052e-7■□□□□ 9.7
EXOSC5Q9NQT4 SREK1-207ENST00000520058 559 ntTSL 214.72□□□□□ -0.052e-7■□□□□ 9.7
EXOSC5Q9NQT4 SREK1-214ENST00000523851 458 ntTSL 312.83□□□□□ -0.362e-7■□□□□ 9.7
EXOSC5Q9NQT4 SREK1-215ENST00000524111 4074 ntTSL 57.62□□□□□ -1.192e-7■□□□□ 9.7
EXOSC5Q9NQT4 SREK1-210ENST00000521691 580 ntTSL 32.25□□□□□ -2.052e-7■□□□□ 9.7
EXOSC5Q9NQT4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.59■□□□□ 0.251e-6■□□□□ 9.7
EXOSC5Q9NQT4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.241e-6■□□□□ 9.7
EXOSC5Q9NQT4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.011e-6■□□□□ 9.7
EXOSC5Q9NQT4 ITGB5-210ENST00000496703 789 ntTSL 212.73□□□□□ -0.375e-8■□□□□ 9.7
EXOSC5Q9NQT4 ITGB5-205ENST00000474838 475 ntTSL 312.5□□□□□ -0.415e-8■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11□□□□□ -0.651e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC11□□□□□ -0.651e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-204ENST00000506563 728 ntTSL 510.5□□□□□ -0.731e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-207ENST00000510106 818 ntTSL 310.43□□□□□ -0.741e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-205ENST00000506789 477 ntTSL 510.35□□□□□ -0.751e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.761e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC10.2□□□□□ -0.781e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-212ENST00000515180 486 ntTSL 310.2□□□□□ -0.781e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-213ENST00000515391 809 ntTSL 210.2□□□□□ -0.781e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC9.51□□□□□ -0.891e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-208ENST00000512687 905 ntTSL 1 (best)9.31□□□□□ -0.921e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-203ENST00000504147 722 ntTSL 58.78□□□□□ -11e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-210ENST00000513629 885 ntTSL 37.3□□□□□ -1.241e-7■□□□□ 9.7
EXOSC5Q9NQT4 CDK7-206ENST00000508726 531 ntTSL 56.36□□□□□ -1.391e-7■□□□□ 9.7
EXOSC5Q9NQT4 SETD5-209ENST00000431285 1824 ntTSL 520.39■□□□□ 0.866e-6■□□□□ 9.6
EXOSC5Q9NQT4 SETD5-211ENST00000443339 3478 ntTSL 29.61□□□□□ -0.876e-6■□□□□ 9.6
EXOSC5Q9NQT4 SETD5-210ENST00000442373 900 ntTSL 58.12□□□□□ -1.116e-6■□□□□ 9.6
EXOSC5Q9NQT4 SETD5-226ENST00000490791 667 ntTSL 36.14□□□□□ -1.436e-6■□□□□ 9.6
EXOSC5Q9NQT4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.293e-7■□□□□ 9.6
EXOSC5Q9NQT4 RBM14-RBM4-202ENST00000421355 2034 ntTSL 216.6■□□□□ 0.253e-7■□□□□ 9.6
EXOSC5Q9NQT4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.73□□□□□ -0.053e-7■□□□□ 9.6
EXOSC5Q9NQT4 COL18A1-201ENST00000342220 3386 ntTSL 211.09□□□□□ -0.632e-6■□□□□ 9.6
EXOSC5Q9NQT4 FNDC3B-208ENST00000476794 682 ntTSL 35.82□□□□□ -1.483e-9■□□□□ 9.6
EXOSC5Q9NQT4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.71□□□□□ -0.381e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-205ENST00000557884 958 ntTSL 311.57□□□□□ -0.561e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-221ENST00000561442 542 ntTSL 511.57□□□□□ -0.561e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.751e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-206ENST00000558157 2439 ntTSL 1 (best)9.53□□□□□ -0.881e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-219ENST00000561326 543 ntTSL 48.74□□□□□ -1.011e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-216ENST00000559873 584 ntTSL 58.28□□□□□ -1.081e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-217ENST00000560070 545 ntTSL 46.81□□□□□ -1.321e-7■□□□□ 9.5
EXOSC5Q9NQT4 USP3-210ENST00000559192 5499 ntTSL 1 (best)6.46□□□□□ -1.381e-7■□□□□ 9.5
EXOSC5Q9NQT4 PRRC2C-205ENST00000463586 3771 ntTSL 25.68□□□□□ -1.59e-7■□□□□ 9.5
EXOSC5Q9NQT4 COL27A1-205ENST00000485397 463 ntTSL 515.14■□□□□ 0.011e-5■□□□□ 9.5
EXOSC5Q9NQT4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.019e-6■□□□□ 9.4
EXOSC5Q9NQT4 UBE3A-222ENST00000630907 889 ntTSL 521.27■■□□□ 19e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.7■□□□□ 0.99e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.889e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.789e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.749e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-220ENST00000519767 970 ntTSL 1 (best)19.66■□□□□ 0.749e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
EXOSC5Q9NQT4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.739e-6■□□□□ 9.4
Retrieved 100 of 8,799 protein–RNA pairs in 38 ms