RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
CDK7-204ENST00000506563 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
CDK7-204ENST00000506563 ABCC9O60706 1549 aa25.64■■□□□ 1.7
CDK7-204ENST00000506563 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
CDK7-204ENST00000506563 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
CDK7-204ENST00000506563 NACADO15069 1562 aa24.8■■□□□ 1.56
CDK7-204ENST00000506563 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
CDK7-204ENST00000506563 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
CDK7-204ENST00000506563 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
CDK7-204ENST00000506563 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
CDK7-204ENST00000506563 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
CDK7-204ENST00000506563 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
CDK7-204ENST00000506563 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CDK7-204ENST00000506563 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
CDK7-204ENST00000506563 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
CDK7-204ENST00000506563 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
CDK7-204ENST00000506563 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
CDK7-204ENST00000506563 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
CDK7-204ENST00000506563 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
CDK7-204ENST00000506563 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
CDK7-204ENST00000506563 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
CDK7-204ENST00000506563 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
CDK7-204ENST00000506563 WIZO95785 1651 aa23.01■■□□□ 1.27
CDK7-204ENST00000506563 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
CDK7-204ENST00000506563 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
CDK7-204ENST00000506563 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
CDK7-204ENST00000506563 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
CDK7-204ENST00000506563 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
CDK7-204ENST00000506563 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
CDK7-204ENST00000506563 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
CDK7-204ENST00000506563 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
CDK7-204ENST00000506563 CCDC88BA6NC98 1476 aa22.48■■□□□ 1.19
CDK7-204ENST00000506563 NESP48681 1621 aa22.31■■□□□ 1.16
CDK7-204ENST00000506563 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
CDK7-204ENST00000506563 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
CDK7-204ENST00000506563 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
CDK7-204ENST00000506563 CFTRP13569 1480 aa22.2■■□□□ 1.14
CDK7-204ENST00000506563 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
CDK7-204ENST00000506563 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
CDK7-204ENST00000506563 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
CDK7-204ENST00000506563 KIF21AQ7Z4S6 1674 aa22.05■■□□□ 1.12
CDK7-204ENST00000506563 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
CDK7-204ENST00000506563 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
CDK7-204ENST00000506563 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
CDK7-204ENST00000506563 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
CDK7-204ENST00000506563 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
CDK7-204ENST00000506563 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
CDK7-204ENST00000506563 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
CDK7-204ENST00000506563 CUX1P39880 1505 aa21.74■■□□□ 1.07
CDK7-204ENST00000506563 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
CDK7-204ENST00000506563 WDR62O43379 1518 aa21.73■■□□□ 1.07
CDK7-204ENST00000506563 TOPBP1Q92547 1522 aa21.73■■□□□ 1.07
CDK7-204ENST00000506563 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
CDK7-204ENST00000506563 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
CDK7-204ENST00000506563 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
CDK7-204ENST00000506563 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
CDK7-204ENST00000506563 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
CDK7-204ENST00000506563 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
CDK7-204ENST00000506563 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
CDK7-204ENST00000506563 CUX2O14529 1486 aa21.57■■□□□ 1.04
CDK7-204ENST00000506563 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.04
CDK7-204ENST00000506563 SOGA1O94964 1423 aa21.51■■□□□ 1.03
CDK7-204ENST00000506563 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
CDK7-204ENST00000506563 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
CDK7-204ENST00000506563 DNAJC5Q9H3Z4 198 aa21.4■■□□□ 1.02
CDK7-204ENST00000506563 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
CDK7-204ENST00000506563 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
CDK7-204ENST00000506563 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
CDK7-204ENST00000506563 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
CDK7-204ENST00000506563 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 12e-6■■■■□ 22
CDK7-204ENST00000506563 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
CDK7-204ENST00000506563 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
CDK7-204ENST00000506563 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
CDK7-204ENST00000506563 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
CDK7-204ENST00000506563 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
CDK7-204ENST00000506563 FAM9AQ8IZU1 332 aaPredicted RBP21.24■□□□□ 0.99
CDK7-204ENST00000506563 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
CDK7-204ENST00000506563 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
CDK7-204ENST00000506563 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
CDK7-204ENST00000506563 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
CDK7-204ENST00000506563 IGF1RP08069 1367 aa21.1■□□□□ 0.97
CDK7-204ENST00000506563 EEA1Q15075 1411 aa21.1■□□□□ 0.97
CDK7-204ENST00000506563 FBLN2P98095 1184 aa21.07■□□□□ 0.96
CDK7-204ENST00000506563 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
CDK7-204ENST00000506563 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
CDK7-204ENST00000506563 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
CDK7-204ENST00000506563 CUL7Q14999 1698 aa21.04■□□□□ 0.96
CDK7-204ENST00000506563 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
CDK7-204ENST00000506563 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
CDK7-204ENST00000506563 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
CDK7-204ENST00000506563 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
CDK7-204ENST00000506563 CHD1O14646 1710 aa20.99■□□□□ 0.95
CDK7-204ENST00000506563 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
CDK7-204ENST00000506563 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
CDK7-204ENST00000506563 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
CDK7-204ENST00000506563 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
CDK7-204ENST00000506563 KIF21BO75037 1637 aa20.89■□□□□ 0.93
CDK7-204ENST00000506563 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
CDK7-204ENST00000506563 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
CDK7-204ENST00000506563 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms