RNA–Protein interactions for RNA: ENST00000521691.5

SREK1-210, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 580 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-210ENST00000521691 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
SREK1-210ENST00000521691 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
SREK1-210ENST00000521691 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
SREK1-210ENST00000521691 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
SREK1-210ENST00000521691 FOXD1Q16676 465 aa14.55□□□□□ -0.08
SREK1-210ENST00000521691 PLPPR3Q6T4P5 718 aa14.37□□□□□ -0.11
SREK1-210ENST00000521691 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
SREK1-210ENST00000521691 ADRA2BP18089 450 aa13.77□□□□□ -0.21
SREK1-210ENST00000521691 PIAS4Q8N2W9 510 aaPredicted RBP13.65□□□□□ -0.22
SREK1-210ENST00000521691 MSH5O43196 834 aa13.52□□□□□ -0.25
SREK1-210ENST00000521691 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
SREK1-210ENST00000521691 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
SREK1-210ENST00000521691 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
SREK1-210ENST00000521691 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
SREK1-210ENST00000521691 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
SREK1-210ENST00000521691 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
SREK1-210ENST00000521691 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
SREK1-210ENST00000521691 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
SREK1-210ENST00000521691 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
SREK1-210ENST00000521691 KCNA4P22459 653 aa12.08□□□□□ -0.48
SREK1-210ENST00000521691 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
SREK1-210ENST00000521691 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
SREK1-210ENST00000521691 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
SREK1-210ENST00000521691 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
SREK1-210ENST00000521691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.575e-8■■■□□ 16.1
SREK1-210ENST00000521691 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
SREK1-210ENST00000521691 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
SREK1-210ENST00000521691 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
SREK1-210ENST00000521691 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
SREK1-210ENST00000521691 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
SREK1-210ENST00000521691 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.61
SREK1-210ENST00000521691 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
SREK1-210ENST00000521691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
SREK1-210ENST00000521691 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
SREK1-210ENST00000521691 ZBTB22O15209 634 aa11.13□□□□□ -0.63
SREK1-210ENST00000521691 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
SREK1-210ENST00000521691 APLP2Q06481 763 aa11.07□□□□□ -0.64
SREK1-210ENST00000521691 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
SREK1-210ENST00000521691 CAPN15O75808 1086 aa10.99□□□□□ -0.65
SREK1-210ENST00000521691 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
SREK1-210ENST00000521691 DSG3P32926 999 aa10.92□□□□□ -0.66
SREK1-210ENST00000521691 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
SREK1-210ENST00000521691 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
SREK1-210ENST00000521691 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
SREK1-210ENST00000521691 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
SREK1-210ENST00000521691 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
SREK1-210ENST00000521691 ABCB7O75027 752 aa10.76□□□□□ -0.69
SREK1-210ENST00000521691 POLA2Q14181 598 aa10.69□□□□□ -0.7
SREK1-210ENST00000521691 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
SREK1-210ENST00000521691 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
SREK1-210ENST00000521691 FBLN2P98095 1184 aa10.39□□□□□ -0.75
SREK1-210ENST00000521691 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
SREK1-210ENST00000521691 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
SREK1-210ENST00000521691 SPDYE2BA6NHP3 402 aa10.26□□□□□ -0.77
SREK1-210ENST00000521691 SPDYE6P0CI01 402 aa10.26□□□□□ -0.77
SREK1-210ENST00000521691 SPDYE2Q495Y8 402 aa10.26□□□□□ -0.77
SREK1-210ENST00000521691 AKT1S1Q96B36 256 aa10.25□□□□□ -0.77
SREK1-210ENST00000521691 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
SREK1-210ENST00000521691 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
SREK1-210ENST00000521691 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
SREK1-210ENST00000521691 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
SREK1-210ENST00000521691 SPDYE4A6NLX3 237 aa10.02□□□□□ -0.81
SREK1-210ENST00000521691 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
SREK1-210ENST00000521691 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
SREK1-210ENST00000521691 SPDYE1Q8NFV5 336 aaPredicted RBP9.98□□□□□ -0.81
SREK1-210ENST00000521691 POTEHQ6S545 545 aa9.96□□□□□ -0.82
SREK1-210ENST00000521691 PROM2Q8N271 834 aa9.94□□□□□ -0.82
SREK1-210ENST00000521691 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.82
SREK1-210ENST00000521691 PIP4P2Q8N4L2 257 aa9.88□□□□□ -0.83
SREK1-210ENST00000521691 CLEC11AQ9Y240 323 aa9.87□□□□□ -0.83
SREK1-210ENST00000521691 FKBP8Q14318 412 aa9.82□□□□□ -0.84
SREK1-210ENST00000521691 STAG3Q9UJ98 1225 aa9.82□□□□□ -0.84
SREK1-210ENST00000521691 PRR29P0C7W0 189 aa9.79□□□□□ -0.84
SREK1-210ENST00000521691 PRKAR2AP13861 404 aaKnown RBP9.74□□□□□ -0.85
SREK1-210ENST00000521691 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
SREK1-210ENST00000521691 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
SREK1-210ENST00000521691 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
SREK1-210ENST00000521691 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
SREK1-210ENST00000521691 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
SREK1-210ENST00000521691 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
SREK1-210ENST00000521691 HAX1O00165 279 aa9.55□□□□□ -0.88
SREK1-210ENST00000521691 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
SREK1-210ENST00000521691 EVX2Q03828 476 aa9.49□□□□□ -0.89
SREK1-210ENST00000521691 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
SREK1-210ENST00000521691 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
SREK1-210ENST00000521691 MIER1Q8N108 512 aa9.47□□□□□ -0.89
SREK1-210ENST00000521691 CD44P16070 742 aaKnown RBP9.45□□□□□ -0.9
SREK1-210ENST00000521691 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
SREK1-210ENST00000521691 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
SREK1-210ENST00000521691 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
SREK1-210ENST00000521691 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
SREK1-210ENST00000521691 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
SREK1-210ENST00000521691 CLCN6P51797 869 aa9.35□□□□□ -0.91
SREK1-210ENST00000521691 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
SREK1-210ENST00000521691 NUBP1P53384 320 aa9.33□□□□□ -0.92
SREK1-210ENST00000521691 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
SREK1-210ENST00000521691 GABBR2O75899 941 aa9.31□□□□□ -0.92
SREK1-210ENST00000521691 CCDC61Q9Y6R9 512 aa9.3□□□□□ -0.92
SREK1-210ENST00000521691 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
SREK1-210ENST00000521691 TSPYL2Q9H2G4 693 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms