RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
CDK7-203ENST00000504147 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
CDK7-203ENST00000504147 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
CDK7-203ENST00000504147 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
CDK7-203ENST00000504147 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
CDK7-203ENST00000504147 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
CDK7-203ENST00000504147 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
CDK7-203ENST00000504147 ABCC9O60706 1549 aa18.9■□□□□ 0.62
CDK7-203ENST00000504147 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
CDK7-203ENST00000504147 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
CDK7-203ENST00000504147 NACADO15069 1562 aa18.59■□□□□ 0.57
CDK7-203ENST00000504147 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
CDK7-203ENST00000504147 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
CDK7-203ENST00000504147 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
CDK7-203ENST00000504147 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
CDK7-203ENST00000504147 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
CDK7-203ENST00000504147 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDK7-203ENST00000504147 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.46
CDK7-203ENST00000504147 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
CDK7-203ENST00000504147 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
CDK7-203ENST00000504147 BICRAQ9NZM4 1560 aa17.85■□□□□ 0.45
CDK7-203ENST00000504147 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
CDK7-203ENST00000504147 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
CDK7-203ENST00000504147 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
CDK7-203ENST00000504147 WIZO95785 1651 aa17.55■□□□□ 0.4
CDK7-203ENST00000504147 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
CDK7-203ENST00000504147 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
CDK7-203ENST00000504147 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
CDK7-203ENST00000504147 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
CDK7-203ENST00000504147 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
CDK7-203ENST00000504147 FOXD1Q16676 465 aa17.3■□□□□ 0.36
CDK7-203ENST00000504147 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
CDK7-203ENST00000504147 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
CDK7-203ENST00000504147 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
CDK7-203ENST00000504147 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
CDK7-203ENST00000504147 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
CDK7-203ENST00000504147 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
CDK7-203ENST00000504147 ABCC8Q09428 1581 aa16.87■□□□□ 0.29
CDK7-203ENST00000504147 CFTRP13569 1480 aa16.83■□□□□ 0.28
CDK7-203ENST00000504147 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
CDK7-203ENST00000504147 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
CDK7-203ENST00000504147 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
CDK7-203ENST00000504147 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
CDK7-203ENST00000504147 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
CDK7-203ENST00000504147 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
CDK7-203ENST00000504147 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
CDK7-203ENST00000504147 SOGA1O94964 1423 aa16.64■□□□□ 0.25
CDK7-203ENST00000504147 EEA1Q15075 1411 aa16.61■□□□□ 0.25
CDK7-203ENST00000504147 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
CDK7-203ENST00000504147 NESP48681 1621 aa16.59■□□□□ 0.25
CDK7-203ENST00000504147 CUX1P39880 1505 aa16.59■□□□□ 0.25
CDK7-203ENST00000504147 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
CDK7-203ENST00000504147 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
CDK7-203ENST00000504147 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
CDK7-203ENST00000504147 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
CDK7-203ENST00000504147 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
CDK7-203ENST00000504147 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
CDK7-203ENST00000504147 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
CDK7-203ENST00000504147 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
CDK7-203ENST00000504147 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
CDK7-203ENST00000504147 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
CDK7-203ENST00000504147 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
CDK7-203ENST00000504147 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
CDK7-203ENST00000504147 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
CDK7-203ENST00000504147 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
CDK7-203ENST00000504147 UBTFP17480 764 aaKnown RBP16.37■□□□□ 0.21
CDK7-203ENST00000504147 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
CDK7-203ENST00000504147 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
CDK7-203ENST00000504147 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
CDK7-203ENST00000504147 ADRA2BP18089 450 aa16.35■□□□□ 0.21
CDK7-203ENST00000504147 CUX2O14529 1486 aa16.34■□□□□ 0.21
CDK7-203ENST00000504147 KIF21BO75037 1637 aa16.31■□□□□ 0.2
CDK7-203ENST00000504147 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
CDK7-203ENST00000504147 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
CDK7-203ENST00000504147 IGF1RP08069 1367 aa16.29■□□□□ 0.2
CDK7-203ENST00000504147 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
CDK7-203ENST00000504147 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
CDK7-203ENST00000504147 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
CDK7-203ENST00000504147 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
CDK7-203ENST00000504147 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
CDK7-203ENST00000504147 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
CDK7-203ENST00000504147 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
CDK7-203ENST00000504147 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
CDK7-203ENST00000504147 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
CDK7-203ENST00000504147 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
CDK7-203ENST00000504147 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
CDK7-203ENST00000504147 CLIP1P30622 1438 aa16.13■□□□□ 0.17
CDK7-203ENST00000504147 WDR62O43379 1518 aa16.13■□□□□ 0.17
CDK7-203ENST00000504147 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
CDK7-203ENST00000504147 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
CDK7-203ENST00000504147 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
CDK7-203ENST00000504147 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
CDK7-203ENST00000504147 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
CDK7-203ENST00000504147 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
CDK7-203ENST00000504147 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
CDK7-203ENST00000504147 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
CDK7-203ENST00000504147 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■■■□ 22
CDK7-203ENST00000504147 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
CDK7-203ENST00000504147 MSH5O43196 834 aa16.02■□□□□ 0.16
CDK7-203ENST00000504147 CUL7Q14999 1698 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms