Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 AC104417.2-201ENST00000562989 1793 ntBASIC20.06■□□□□ 0.8
RFX6Q8HWS3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 PRKY-204ENST00000533551 1019 ntBASIC20.06■□□□□ 0.8
RFX6Q8HWS3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.06■□□□□ 0.8
RFX6Q8HWS3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 SDHAP1-207ENST00000440850 2000 ntBASIC20.05■□□□□ 0.8
RFX6Q8HWS3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 AC141586.3-201ENST00000562166 1838 ntBASIC20.05■□□□□ 0.8
RFX6Q8HWS3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 AC008403.3-201ENST00000598924 454 ntBASIC20.05■□□□□ 0.8
RFX6Q8HWS3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX6Q8HWS3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 AC004408.2-201ENST00000623613 2777 ntBASIC20.04■□□□□ 0.8
RFX6Q8HWS3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX6Q8HWS3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 AL161938.1-201ENST00000569833 2180 ntBASIC20.03■□□□□ 0.8
RFX6Q8HWS3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX6Q8HWS3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms