Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC110285.6-201ENST00000617652 491 ntBASIC16.82■□□□□ 0.28
BEST4Q8NFU0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
BEST4Q8NFU0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.81■□□□□ 0.28
BEST4Q8NFU0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 RBM17P2-201ENST00000616397 1405 ntBASIC16.81■□□□□ 0.28
BEST4Q8NFU0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.81■□□□□ 0.28
BEST4Q8NFU0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST4Q8NFU0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 AC020916.1-201ENST00000587762 1774 ntBASIC16.8■□□□□ 0.28
BEST4Q8NFU0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST4Q8NFU0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 PGM5P4-201ENST00000421970 445 ntBASIC16.79■□□□□ 0.28
BEST4Q8NFU0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST4Q8NFU0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms