RNA–Protein interactions for RNA: ENST00000641568.1

AP003071.5-201, humanhuman

APPRIS P1 BASIC

Gene AP003071.5, Length 2,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.5-201ENST00000641568 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
AP003071.5-201ENST00000641568 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
AP003071.5-201ENST00000641568 ABCC9O60706 1549 aa33.4■■■□□ 2.94
AP003071.5-201ENST00000641568 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
AP003071.5-201ENST00000641568 DCAF8L2P0C7V8 631 aa32.96■■■□□ 2.87
AP003071.5-201ENST00000641568 DCAF1Q9Y4B6 1507 aa32.53■■■□□ 2.8
AP003071.5-201ENST00000641568 NACADO15069 1562 aa32.35■■■□□ 2.77
AP003071.5-201ENST00000641568 MYO15BQ96JP2 1530 aa32.31■■■□□ 2.76
AP003071.5-201ENST00000641568 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
AP003071.5-201ENST00000641568 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
AP003071.5-201ENST00000641568 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
AP003071.5-201ENST00000641568 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
AP003071.5-201ENST00000641568 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
AP003071.5-201ENST00000641568 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
AP003071.5-201ENST00000641568 CECR2Q9BXF3 1484 aa30.85■■■□□ 2.53
AP003071.5-201ENST00000641568 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.49
AP003071.5-201ENST00000641568 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
AP003071.5-201ENST00000641568 BAZ1AQ9NRL2 1556 aaPredicted RBP30.51■■■□□ 2.48
AP003071.5-201ENST00000641568 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
AP003071.5-201ENST00000641568 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
AP003071.5-201ENST00000641568 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
AP003071.5-201ENST00000641568 WIZO95785 1651 aa30.31■■■□□ 2.44
AP003071.5-201ENST00000641568 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
AP003071.5-201ENST00000641568 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
AP003071.5-201ENST00000641568 PEG3Q9GZU2 1588 aa30.06■■■□□ 2.4
AP003071.5-201ENST00000641568 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
AP003071.5-201ENST00000641568 HRCP23327 699 aa30■■■□□ 2.39
AP003071.5-201ENST00000641568 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
AP003071.5-201ENST00000641568 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
AP003071.5-201ENST00000641568 TOP2AP11388 1531 aaKnown RBP29.9■■■□□ 2.38
AP003071.5-201ENST00000641568 NCAPD3P42695 1498 aa29.89■■■□□ 2.37
AP003071.5-201ENST00000641568 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
AP003071.5-201ENST00000641568 CCDC88BA6NC98 1476 aa29.62■■■□□ 2.33
AP003071.5-201ENST00000641568 PELP1Q8IZL8 1130 aaKnown RBP29.47■■■□□ 2.31
AP003071.5-201ENST00000641568 PPARGC1BQ86YN6 1023 aaKnown RBP29.45■■■□□ 2.3
AP003071.5-201ENST00000641568 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
AP003071.5-201ENST00000641568 NESP48681 1621 aa29.18■■■□□ 2.26
AP003071.5-201ENST00000641568 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
AP003071.5-201ENST00000641568 CFTRP13569 1480 aa29.12■■■□□ 2.25
AP003071.5-201ENST00000641568 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
AP003071.5-201ENST00000641568 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
AP003071.5-201ENST00000641568 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
AP003071.5-201ENST00000641568 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
AP003071.5-201ENST00000641568 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
AP003071.5-201ENST00000641568 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
AP003071.5-201ENST00000641568 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
AP003071.5-201ENST00000641568 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
AP003071.5-201ENST00000641568 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
AP003071.5-201ENST00000641568 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
AP003071.5-201ENST00000641568 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
AP003071.5-201ENST00000641568 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
AP003071.5-201ENST00000641568 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
AP003071.5-201ENST00000641568 CUX1P39880 1505 aa28.61■■■□□ 2.17
AP003071.5-201ENST00000641568 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
AP003071.5-201ENST00000641568 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
AP003071.5-201ENST00000641568 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
AP003071.5-201ENST00000641568 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
AP003071.5-201ENST00000641568 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.15
AP003071.5-201ENST00000641568 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
AP003071.5-201ENST00000641568 MYT1Q01538 1121 aa28.4■■■□□ 2.14
AP003071.5-201ENST00000641568 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.14
AP003071.5-201ENST00000641568 FGD5Q6ZNL6 1462 aa28.38■■■□□ 2.13
AP003071.5-201ENST00000641568 WDR62O43379 1518 aa28.32■■■□□ 2.12
AP003071.5-201ENST00000641568 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
AP003071.5-201ENST00000641568 FAM9AQ8IZU1 332 aaPredicted RBP28.28■■■□□ 2.12
AP003071.5-201ENST00000641568 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
AP003071.5-201ENST00000641568 SOGA1O94964 1423 aa28.26■■■□□ 2.11
AP003071.5-201ENST00000641568 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
AP003071.5-201ENST00000641568 CUX2O14529 1486 aa28.17■■■□□ 2.1
AP003071.5-201ENST00000641568 TRIM26Q12899 539 aaPredicted RBP28.13■■■□□ 2.09
AP003071.5-201ENST00000641568 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
AP003071.5-201ENST00000641568 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
AP003071.5-201ENST00000641568 ABCA10Q8WWZ4 1543 aa28.04■■■□□ 2.08
AP003071.5-201ENST00000641568 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
AP003071.5-201ENST00000641568 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
AP003071.5-201ENST00000641568 ZNF608Q9ULD9 1512 aaPredicted RBP28.01■■■□□ 2.07
AP003071.5-201ENST00000641568 IFT140Q96RY7 1462 aa28■■■□□ 2.07
AP003071.5-201ENST00000641568 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
AP003071.5-201ENST00000641568 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
AP003071.5-201ENST00000641568 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
AP003071.5-201ENST00000641568 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.06
AP003071.5-201ENST00000641568 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.05
AP003071.5-201ENST00000641568 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.05
AP003071.5-201ENST00000641568 EEA1Q15075 1411 aa27.88■■■□□ 2.05
AP003071.5-201ENST00000641568 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
AP003071.5-201ENST00000641568 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
AP003071.5-201ENST00000641568 IGF1RP08069 1367 aa27.82■■■□□ 2.04
AP003071.5-201ENST00000641568 ACIN1Q9UKV3 1341 aaKnown RBP27.79■■■□□ 2.04
AP003071.5-201ENST00000641568 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
AP003071.5-201ENST00000641568 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
AP003071.5-201ENST00000641568 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
AP003071.5-201ENST00000641568 RAPGEF2Q9Y4G8 1499 aa27.69■■■□□ 2.02
AP003071.5-201ENST00000641568 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
AP003071.5-201ENST00000641568 PRXQ9BXM0 1461 aa27.67■■■□□ 2.02
AP003071.5-201ENST00000641568 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
AP003071.5-201ENST00000641568 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
AP003071.5-201ENST00000641568 KIF21BO75037 1637 aa27.63■■■□□ 2.01
AP003071.5-201ENST00000641568 GTF3C3Q9Y5Q9 886 aa27.62■■■□□ 2.01
AP003071.5-201ENST00000641568 CUL7Q14999 1698 aa27.58■■■□□ 2.01
AP003071.5-201ENST00000641568 GOLGA3Q08378 1498 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms