Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV1A0A0A0MS02 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AC069152.1-201ENST00000438030 544 ntBASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 MYC-209ENST00000641252 345 ntBASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 AC018553.1-201ENST00000616682 1458 ntBASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRGV1A0A0A0MS02 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 HLA-L-209ENST00000420110 1011 ntBASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AC073210.2-201ENST00000430369 194 ntBASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AC060766.5-201ENST00000590539 871 ntBASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 HLA-B-256ENST00000639848 1089 ntBASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms