Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.57■■■□□ 2.32
PCDHA6Q9UN73 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.57■■■□□ 2.32
PCDHA6Q9UN73 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHA6Q9UN73 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
PCDHA6Q9UN73 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHA6Q9UN73 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 AC135983.2-203ENST00000454486 1613 ntBASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 AP004833.2-201ENST00000532228 1454 ntBASIC29.55■■■□□ 2.32
PCDHA6Q9UN73 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDHA6Q9UN73 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA6Q9UN73 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA6Q9UN73 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
PCDHA6Q9UN73 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.53■■■□□ 2.32
PCDHA6Q9UN73 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.53■■■□□ 2.32
PCDHA6Q9UN73 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.53■■■□□ 2.32
PCDHA6Q9UN73 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.32
PCDHA6Q9UN73 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.51■■■□□ 2.31
PCDHA6Q9UN73 WHAMMP2-203ENST00000563942 1603 ntBASIC29.51■■■□□ 2.31
PCDHA6Q9UN73 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA6Q9UN73 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHA6Q9UN73 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.5■■■□□ 2.31
PCDHA6Q9UN73 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHA6Q9UN73 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.49■■■□□ 2.31
PCDHA6Q9UN73 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.49■■■□□ 2.31
PCDHA6Q9UN73 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.49■■■□□ 2.31
PCDHA6Q9UN73 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.48■■■□□ 2.31
PCDHA6Q9UN73 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.48■■■□□ 2.31
PCDHA6Q9UN73 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA6Q9UN73 MIR3648-2-201ENST00000581792 180 ntBASIC29.47■■■□□ 2.31
PCDHA6Q9UN73 MIR3648-1-201ENST00000615959 180 ntBASIC29.47■■■□□ 2.31
PCDHA6Q9UN73 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.47■■■□□ 2.31
PCDHA6Q9UN73 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA6Q9UN73 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L13-201ENST00000554103 1267 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L15-201ENST00000611059 1267 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L23-201ENST00000615195 1269 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L24-201ENST00000617576 1269 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L22-201ENST00000618238 1269 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L20-201ENST00000619712 1269 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L21-201ENST00000622058 1269 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L10-201ENST00000622460 1267 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 DUX4L25-201ENST00000624915 1269 ntBASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
PCDHA6Q9UN73 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA6Q9UN73 CR559946.2-201ENST00000623684 991 ntBASIC29.45■■■□□ 2.31
PCDHA6Q9UN73 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.45■■■□□ 2.31
PCDHA6Q9UN73 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.44■■■□□ 2.3
PCDHA6Q9UN73 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.44■■■□□ 2.3
PCDHA6Q9UN73 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.44■■■□□ 2.3
PCDHA6Q9UN73 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.44■■■□□ 2.3
PCDHA6Q9UN73 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA6Q9UN73 HLA-V-202ENST00000446817 847 ntBASIC29.43■■■□□ 2.3
PCDHA6Q9UN73 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.43■■■□□ 2.3
PCDHA6Q9UN73 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
PCDHA6Q9UN73 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA6Q9UN73 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA6Q9UN73 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 AC016575.1-201ENST00000607026 382 ntBASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA6Q9UN73 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA6Q9UN73 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA6Q9UN73 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA6Q9UN73 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA6Q9UN73 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
PCDHA6Q9UN73 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA6Q9UN73 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.4■■■□□ 2.3
PCDHA6Q9UN73 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA6Q9UN73 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA6Q9UN73 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHA6Q9UN73 AC100797.4-201ENST00000631653 1827 ntBASIC29.39■■■□□ 2.3
PCDHA6Q9UN73 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
PCDHA6Q9UN73 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.38■■■□□ 2.29
PCDHA6Q9UN73 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.38■■■□□ 2.29
PCDHA6Q9UN73 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.38■■■□□ 2.29
PCDHA6Q9UN73 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PCDHA6Q9UN73 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHA6Q9UN73 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.37■■■□□ 2.29
PCDHA6Q9UN73 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHA6Q9UN73 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.37■■■□□ 2.29
PCDHA6Q9UN73 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.36■■■□□ 2.29
PCDHA6Q9UN73 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA6Q9UN73 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA6Q9UN73 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA6Q9UN73 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.36■■■□□ 2.29
PCDHA6Q9UN73 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms