Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PRDM9Q9NQV7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PRDM9Q9NQV7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.28■■□□□ 1.48
PRDM9Q9NQV7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.28■■□□□ 1.48
PRDM9Q9NQV7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.28■■□□□ 1.48
PRDM9Q9NQV7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.27■■□□□ 1.48
PRDM9Q9NQV7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.27■■□□□ 1.48
PRDM9Q9NQV7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PRDM9Q9NQV7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.26■■□□□ 1.47
PRDM9Q9NQV7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PRDM9Q9NQV7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
PRDM9Q9NQV7 AC135983.2-203ENST00000454486 1613 ntBASIC24.25■■□□□ 1.47
PRDM9Q9NQV7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRDM9Q9NQV7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRDM9Q9NQV7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.25■■□□□ 1.47
PRDM9Q9NQV7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.24■■□□□ 1.47
PRDM9Q9NQV7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PRDM9Q9NQV7 AC139426.1-201ENST00000568218 2529 ntBASIC24.24■■□□□ 1.47
PRDM9Q9NQV7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.24■■□□□ 1.47
PRDM9Q9NQV7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.23■■□□□ 1.47
PRDM9Q9NQV7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PRDM9Q9NQV7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PRDM9Q9NQV7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 DUX4L11-201ENST00000611504 1267 ntBASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 DUX4L12-201ENST00000614593 1267 ntBASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 DUX4L14-201ENST00000621227 1267 ntBASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRDM9Q9NQV7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.2■■□□□ 1.46
PRDM9Q9NQV7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRDM9Q9NQV7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRDM9Q9NQV7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRDM9Q9NQV7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRDM9Q9NQV7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PRDM9Q9NQV7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRDM9Q9NQV7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRDM9Q9NQV7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRDM9Q9NQV7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRDM9Q9NQV7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRDM9Q9NQV7 WHAMMP2-203ENST00000563942 1603 ntBASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRDM9Q9NQV7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.16■■□□□ 1.46
PRDM9Q9NQV7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
PRDM9Q9NQV7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRDM9Q9NQV7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRDM9Q9NQV7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRDM9Q9NQV7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRDM9Q9NQV7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.15■■□□□ 1.46
PRDM9Q9NQV7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PRDM9Q9NQV7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.14■■□□□ 1.45
PRDM9Q9NQV7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L13-201ENST00000554103 1267 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L15-201ENST00000611059 1267 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L23-201ENST00000615195 1269 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L24-201ENST00000617576 1269 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L22-201ENST00000618238 1269 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L20-201ENST00000619712 1269 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L21-201ENST00000622058 1269 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L10-201ENST00000622460 1267 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 DUX4L25-201ENST00000624915 1269 ntBASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PRDM9Q9NQV7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.12■■□□□ 1.45
PRDM9Q9NQV7 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.12■■□□□ 1.45
PRDM9Q9NQV7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PRDM9Q9NQV7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PRDM9Q9NQV7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PRDM9Q9NQV7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PRDM9Q9NQV7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 DRD5P2-201ENST00000421395 2012 ntBASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 AC142086.6-201ENST00000621154 1765 ntBASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.1■■□□□ 1.45
PRDM9Q9NQV7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PRDM9Q9NQV7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PRDM9Q9NQV7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PRDM9Q9NQV7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PRDM9Q9NQV7 MIR3648-2-201ENST00000581792 180 ntBASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms