Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
UPF2Q9HAU5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
UPF2Q9HAU5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
UPF2Q9HAU5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
UPF2Q9HAU5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
UPF2Q9HAU5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
UPF2Q9HAU5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
UPF2Q9HAU5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
UPF2Q9HAU5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
UPF2Q9HAU5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
UPF2Q9HAU5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
UPF2Q9HAU5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.25■■■□□ 2.59
UPF2Q9HAU5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
UPF2Q9HAU5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
UPF2Q9HAU5 LINC01003-201ENST00000564834 1764 ntBASIC31.25■■■□□ 2.59
UPF2Q9HAU5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
UPF2Q9HAU5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.24■■■□□ 2.59
UPF2Q9HAU5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
UPF2Q9HAU5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
UPF2Q9HAU5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.23■■■□□ 2.59
UPF2Q9HAU5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
UPF2Q9HAU5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
UPF2Q9HAU5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
UPF2Q9HAU5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
UPF2Q9HAU5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
UPF2Q9HAU5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
UPF2Q9HAU5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
UPF2Q9HAU5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
UPF2Q9HAU5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
UPF2Q9HAU5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
UPF2Q9HAU5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
UPF2Q9HAU5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.2■■■□□ 2.59
UPF2Q9HAU5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.19■■■□□ 2.58
UPF2Q9HAU5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.19■■■□□ 2.58
UPF2Q9HAU5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
UPF2Q9HAU5 AC127502.1-201ENST00000399971 1502 ntBASIC31.18■■■□□ 2.58
UPF2Q9HAU5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
UPF2Q9HAU5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
UPF2Q9HAU5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
UPF2Q9HAU5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
UPF2Q9HAU5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
UPF2Q9HAU5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
UPF2Q9HAU5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
UPF2Q9HAU5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
UPF2Q9HAU5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
UPF2Q9HAU5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
UPF2Q9HAU5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
UPF2Q9HAU5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
UPF2Q9HAU5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
UPF2Q9HAU5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
UPF2Q9HAU5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
UPF2Q9HAU5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
UPF2Q9HAU5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
UPF2Q9HAU5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
UPF2Q9HAU5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.11■■■□□ 2.57
UPF2Q9HAU5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.11■■■□□ 2.57
UPF2Q9HAU5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
UPF2Q9HAU5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
UPF2Q9HAU5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
UPF2Q9HAU5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
UPF2Q9HAU5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.1■■■□□ 2.57
UPF2Q9HAU5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
UPF2Q9HAU5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
UPF2Q9HAU5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
UPF2Q9HAU5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.09■■■□□ 2.57
UPF2Q9HAU5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.08■■■□□ 2.57
UPF2Q9HAU5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
UPF2Q9HAU5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
UPF2Q9HAU5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
UPF2Q9HAU5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC31.07■■■□□ 2.56
UPF2Q9HAU5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.06■■■□□ 2.56
UPF2Q9HAU5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.06■■■□□ 2.56
UPF2Q9HAU5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.06■■■□□ 2.56
UPF2Q9HAU5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
UPF2Q9HAU5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.05■■■□□ 2.56
UPF2Q9HAU5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
UPF2Q9HAU5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
UPF2Q9HAU5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
UPF2Q9HAU5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.03■■■□□ 2.56
UPF2Q9HAU5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
UPF2Q9HAU5 AC100797.4-201ENST00000631653 1827 ntBASIC31.03■■■□□ 2.56
UPF2Q9HAU5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.03■■■□□ 2.56
UPF2Q9HAU5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
UPF2Q9HAU5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.02■■■□□ 2.56
UPF2Q9HAU5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
UPF2Q9HAU5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
UPF2Q9HAU5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms