Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SPCS2P3-201ENST00000500401 656 ntBASIC8.22□□□□□ -1.09
HMCN1Q96RW7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMCN1Q96RW7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMCN1Q96RW7 AC129492.7-201ENST00000622992 756 ntBASIC8.22□□□□□ -1.09
HMCN1Q96RW7 DUX4L18-201ENST00000553347 1267 ntBASIC8.22□□□□□ -1.09
HMCN1Q96RW7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
HMCN1Q96RW7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC8.21□□□□□ -1.09
HMCN1Q96RW7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HMCN1Q96RW7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HMCN1Q96RW7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
HMCN1Q96RW7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC8.21□□□□□ -1.1
HMCN1Q96RW7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HMCN1Q96RW7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HMCN1Q96RW7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC8.21□□□□□ -1.1
HMCN1Q96RW7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC8.21□□□□□ -1.1
HMCN1Q96RW7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC8.2□□□□□ -1.1
HMCN1Q96RW7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HMCN1Q96RW7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HMCN1Q96RW7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HMCN1Q96RW7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
HMCN1Q96RW7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HMCN1Q96RW7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 AC103834.1-201ENST00000520383 144 ntBASIC8.18□□□□□ -1.1
HMCN1Q96RW7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HMCN1Q96RW7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
HMCN1Q96RW7 AC092296.2-201ENST00000589470 999 ntBASIC8.17□□□□□ -1.1
HMCN1Q96RW7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMCN1Q96RW7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMCN1Q96RW7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMCN1Q96RW7 AL139246.5-201ENST00000606645 996 ntBASIC8.17□□□□□ -1.1
HMCN1Q96RW7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC8.17□□□□□ -1.1
HMCN1Q96RW7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HMCN1Q96RW7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMCN1Q96RW7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 BHLHE23-202ENST00000612929 1109 ntBASIC8.15□□□□□ -1.1
HMCN1Q96RW7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 AC104564.3-201ENST00000582367 638 ntBASIC8.15□□□□□ -1.1
HMCN1Q96RW7 ESRRAP2-201ENST00000418437 1549 ntBASIC8.15□□□□□ -1.1
HMCN1Q96RW7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HMCN1Q96RW7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC8.14□□□□□ -1.11
HMCN1Q96RW7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 AC010980.1-201ENST00000587192 1142 ntBASIC8.13□□□□□ -1.11
HMCN1Q96RW7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC8.13□□□□□ -1.11
HMCN1Q96RW7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HMCN1Q96RW7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC8.11□□□□□ -1.11
HMCN1Q96RW7 AC005837.3-201ENST00000612163 286 ntBASIC8.11□□□□□ -1.11
HMCN1Q96RW7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms