Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 MIR6090-201ENST00000622481 60 ntBASIC22.02■■□□□ 1.12
HIST1H2AAQ96QV6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HIST1H2AAQ96QV6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HIST1H2AAQ96QV6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.01■■□□□ 1.11
HIST1H2AAQ96QV6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HIST1H2AAQ96QV6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22■■□□□ 1.11
HIST1H2AAQ96QV6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H2AAQ96QV6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H2AAQ96QV6 AL162393.1-201ENST00000437852 946 ntBASIC21.99■■□□□ 1.11
HIST1H2AAQ96QV6 AC087741.3-201ENST00000624270 1347 ntBASIC21.99■■□□□ 1.11
HIST1H2AAQ96QV6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.98■■□□□ 1.11
HIST1H2AAQ96QV6 DRD5P2-201ENST00000421395 2012 ntBASIC21.98■■□□□ 1.11
HIST1H2AAQ96QV6 AC044849.2-201ENST00000606596 710 ntBASIC21.98■■□□□ 1.11
HIST1H2AAQ96QV6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIST1H2AAQ96QV6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST1H2AAQ96QV6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST1H2AAQ96QV6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST1H2AAQ96QV6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HIST1H2AAQ96QV6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HIST1H2AAQ96QV6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HIST1H2AAQ96QV6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.96■■□□□ 1.11
HIST1H2AAQ96QV6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H2AAQ96QV6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H2AAQ96QV6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H2AAQ96QV6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H2AAQ96QV6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST1H2AAQ96QV6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H2AAQ96QV6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H2AAQ96QV6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H2AAQ96QV6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H2AAQ96QV6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.92■■□□□ 1.1
HIST1H2AAQ96QV6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AAQ96QV6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AAQ96QV6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AAQ96QV6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H2AAQ96QV6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H2AAQ96QV6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H2AAQ96QV6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H2AAQ96QV6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HIST1H2AAQ96QV6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
HIST1H2AAQ96QV6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.89■■□□□ 1.09
HIST1H2AAQ96QV6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H2AAQ96QV6 AC100797.4-201ENST00000631653 1827 ntBASIC21.87■■□□□ 1.09
HIST1H2AAQ96QV6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.87■■□□□ 1.09
HIST1H2AAQ96QV6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.87■■□□□ 1.09
HIST1H2AAQ96QV6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST1H2AAQ96QV6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST1H2AAQ96QV6 LINC00273-201ENST00000539813 1452 ntBASIC21.86■■□□□ 1.09
HIST1H2AAQ96QV6 AC135983.2-203ENST00000454486 1613 ntBASIC21.86■■□□□ 1.09
HIST1H2AAQ96QV6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H2AAQ96QV6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
HIST1H2AAQ96QV6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.85■■□□□ 1.09
HIST1H2AAQ96QV6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AAQ96QV6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.85■■□□□ 1.09
HIST1H2AAQ96QV6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AAQ96QV6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H2AAQ96QV6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AAQ96QV6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST1H2AAQ96QV6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AAQ96QV6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HIST1H2AAQ96QV6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
HIST1H2AAQ96QV6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H2AAQ96QV6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.83■■□□□ 1.09
HIST1H2AAQ96QV6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.83■■□□□ 1.09
HIST1H2AAQ96QV6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms