Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
LRRC3BQ96PB8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
LRRC3BQ96PB8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
LRRC3BQ96PB8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.72■■□□□ 1.87
LRRC3BQ96PB8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LRRC3BQ96PB8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
LRRC3BQ96PB8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LRRC3BQ96PB8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
LRRC3BQ96PB8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LRRC3BQ96PB8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
LRRC3BQ96PB8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.69■■□□□ 1.86
LRRC3BQ96PB8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
LRRC3BQ96PB8 RNF126P1-201ENST00000567452 1320 ntBASIC26.68■■□□□ 1.86
LRRC3BQ96PB8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.68■■□□□ 1.86
LRRC3BQ96PB8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.68■■□□□ 1.86
LRRC3BQ96PB8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LRRC3BQ96PB8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.67■■□□□ 1.86
LRRC3BQ96PB8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LRRC3BQ96PB8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
LRRC3BQ96PB8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRRC3BQ96PB8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
LRRC3BQ96PB8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LRRC3BQ96PB8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
LRRC3BQ96PB8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
LRRC3BQ96PB8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRRC3BQ96PB8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
LRRC3BQ96PB8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LRRC3BQ96PB8 AC008813.1-201ENST00000536597 885 ntBASIC26.63■■□□□ 1.85
LRRC3BQ96PB8 ABHD17AP5-201ENST00000580133 923 ntBASIC26.63■■□□□ 1.85
LRRC3BQ96PB8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.62■■□□□ 1.85
LRRC3BQ96PB8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LRRC3BQ96PB8 AC022413.1-201ENST00000624602 984 ntBASIC26.62■■□□□ 1.85
LRRC3BQ96PB8 AC110285.7-201ENST00000624417 1536 ntBASIC26.61■■□□□ 1.85
LRRC3BQ96PB8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC3BQ96PB8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC3BQ96PB8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.6■■□□□ 1.85
LRRC3BQ96PB8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
LRRC3BQ96PB8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.6■■□□□ 1.85
LRRC3BQ96PB8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LRRC3BQ96PB8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
LRRC3BQ96PB8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LRRC3BQ96PB8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LRRC3BQ96PB8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
LRRC3BQ96PB8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC3BQ96PB8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC3BQ96PB8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC3BQ96PB8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.58■■□□□ 1.85
LRRC3BQ96PB8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC3BQ96PB8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.58■■□□□ 1.85
LRRC3BQ96PB8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.57■■□□□ 1.84
LRRC3BQ96PB8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC3BQ96PB8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC3BQ96PB8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC3BQ96PB8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC3BQ96PB8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.56■■□□□ 1.84
LRRC3BQ96PB8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.56■■□□□ 1.84
LRRC3BQ96PB8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC3BQ96PB8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC3BQ96PB8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC3BQ96PB8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC3BQ96PB8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LRRC3BQ96PB8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LRRC3BQ96PB8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.54■■□□□ 1.84
LRRC3BQ96PB8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
LRRC3BQ96PB8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LRRC3BQ96PB8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.51■■□□□ 1.83
LRRC3BQ96PB8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.51■■□□□ 1.83
LRRC3BQ96PB8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LRRC3BQ96PB8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.51■■□□□ 1.83
LRRC3BQ96PB8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC3BQ96PB8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
LRRC3BQ96PB8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC3BQ96PB8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
LRRC3BQ96PB8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRRC3BQ96PB8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRRC3BQ96PB8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.48■■□□□ 1.83
LRRC3BQ96PB8 AC148477.6-201ENST00000623746 465 ntBASIC26.48■■□□□ 1.83
LRRC3BQ96PB8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
LRRC3BQ96PB8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.47■■□□□ 1.83
LRRC3BQ96PB8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
LRRC3BQ96PB8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.46■■□□□ 1.83
LRRC3BQ96PB8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRRC3BQ96PB8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
LRRC3BQ96PB8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LRRC3BQ96PB8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
LRRC3BQ96PB8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LRRC3BQ96PB8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LRRC3BQ96PB8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
LRRC3BQ96PB8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LRRC3BQ96PB8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.45■■□□□ 1.82
LRRC3BQ96PB8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LRRC3BQ96PB8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LRRC3BQ96PB8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LRRC3BQ96PB8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms