Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB3Q92617 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPB3Q92617 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB3Q92617 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB3Q92617 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPB3Q92617 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB3Q92617 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.12■□□□□ 0.81
NPIPB3Q92617 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPB3Q92617 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB3Q92617 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB3Q92617 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPB3Q92617 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
NPIPB3Q92617 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NPIPB3Q92617 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB3Q92617 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB3Q92617 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB3Q92617 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB3Q92617 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB3Q92617 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB3Q92617 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NPIPB3Q92617 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPB3Q92617 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPB3Q92617 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPB3Q92617 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.08■□□□□ 0.81
NPIPB3Q92617 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NPIPB3Q92617 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPB3Q92617 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPB3Q92617 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NPIPB3Q92617 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NPIPB3Q92617 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB3Q92617 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB3Q92617 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.07■□□□□ 0.8
NPIPB3Q92617 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB3Q92617 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB3Q92617 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.06■□□□□ 0.8
NPIPB3Q92617 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB3Q92617 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB3Q92617 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.06■□□□□ 0.8
NPIPB3Q92617 AC100797.4-201ENST00000631653 1827 ntBASIC20.06■□□□□ 0.8
NPIPB3Q92617 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NPIPB3Q92617 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB3Q92617 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.05■□□□□ 0.8
NPIPB3Q92617 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NPIPB3Q92617 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB3Q92617 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB3Q92617 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB3Q92617 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPB3Q92617 MIR762-201ENST00000390236 83 ntBASIC20.04■□□□□ 0.8
NPIPB3Q92617 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.04■□□□□ 0.8
NPIPB3Q92617 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NPIPB3Q92617 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPB3Q92617 LINC01003-201ENST00000564834 1764 ntBASIC20.03■□□□□ 0.8
NPIPB3Q92617 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB3Q92617 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPB3Q92617 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPB3Q92617 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
NPIPB3Q92617 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPB3Q92617 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.01■□□□□ 0.79
NPIPB3Q92617 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPB3Q92617 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPIPB3Q92617 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPIPB3Q92617 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.01■□□□□ 0.79
NPIPB3Q92617 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.01■□□□□ 0.79
NPIPB3Q92617 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPB3Q92617 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPB3Q92617 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20■□□□□ 0.79
NPIPB3Q92617 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20■□□□□ 0.79
NPIPB3Q92617 CHML-205ENST00000638160 705 ntTSL 3 BASIC20■□□□□ 0.79
NPIPB3Q92617 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPB3Q92617 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPB3Q92617 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
NPIPB3Q92617 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NPIPB3Q92617 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPB3Q92617 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.99■□□□□ 0.79
NPIPB3Q92617 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPB3Q92617 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPB3Q92617 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPB3Q92617 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NPIPB3Q92617 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NPIPB3Q92617 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.97■□□□□ 0.79
NPIPB3Q92617 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.97■□□□□ 0.79
NPIPB3Q92617 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NPIPB3Q92617 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.97■□□□□ 0.79
NPIPB3Q92617 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPB3Q92617 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPB3Q92617 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPIPB3Q92617 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
NPIPB3Q92617 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.96■□□□□ 0.79
NPIPB3Q92617 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPB3Q92617 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPB3Q92617 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPIPB3Q92617 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPB3Q92617 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.94■□□□□ 0.78
NPIPB3Q92617 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.94■□□□□ 0.78
NPIPB3Q92617 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.94■□□□□ 0.78
NPIPB3Q92617 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPB3Q92617 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPB3Q92617 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPIPB3Q92617 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.94■□□□□ 0.78
NPIPB3Q92617 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms