Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
EFCAB3Q8N7B9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
EFCAB3Q8N7B9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.14■■□□□ 1.61
EFCAB3Q8N7B9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
EFCAB3Q8N7B9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
EFCAB3Q8N7B9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
EFCAB3Q8N7B9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
EFCAB3Q8N7B9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.13■■□□□ 1.61
EFCAB3Q8N7B9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
EFCAB3Q8N7B9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
EFCAB3Q8N7B9 ZNRF2P2-203ENST00000454624 420 ntBASIC25.12■■□□□ 1.61
EFCAB3Q8N7B9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.12■■□□□ 1.61
EFCAB3Q8N7B9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
EFCAB3Q8N7B9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
EFCAB3Q8N7B9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
EFCAB3Q8N7B9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
EFCAB3Q8N7B9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
EFCAB3Q8N7B9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
EFCAB3Q8N7B9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.1■■□□□ 1.61
EFCAB3Q8N7B9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
EFCAB3Q8N7B9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
EFCAB3Q8N7B9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
EFCAB3Q8N7B9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
EFCAB3Q8N7B9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.08■■□□□ 1.61
EFCAB3Q8N7B9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
EFCAB3Q8N7B9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
EFCAB3Q8N7B9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
EFCAB3Q8N7B9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
EFCAB3Q8N7B9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
EFCAB3Q8N7B9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.07■■□□□ 1.6
EFCAB3Q8N7B9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
EFCAB3Q8N7B9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
EFCAB3Q8N7B9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
EFCAB3Q8N7B9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
EFCAB3Q8N7B9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
EFCAB3Q8N7B9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.05■■□□□ 1.6
EFCAB3Q8N7B9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.05■■□□□ 1.6
EFCAB3Q8N7B9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
EFCAB3Q8N7B9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
EFCAB3Q8N7B9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
EFCAB3Q8N7B9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
EFCAB3Q8N7B9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
EFCAB3Q8N7B9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
EFCAB3Q8N7B9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
EFCAB3Q8N7B9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.03■■□□□ 1.6
EFCAB3Q8N7B9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.02■■□□□ 1.6
EFCAB3Q8N7B9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
EFCAB3Q8N7B9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
EFCAB3Q8N7B9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.01■■□□□ 1.59
EFCAB3Q8N7B9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
EFCAB3Q8N7B9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.01■■□□□ 1.59
EFCAB3Q8N7B9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25■■□□□ 1.59
EFCAB3Q8N7B9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
EFCAB3Q8N7B9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
EFCAB3Q8N7B9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EFCAB3Q8N7B9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EFCAB3Q8N7B9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
EFCAB3Q8N7B9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
EFCAB3Q8N7B9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.99■■□□□ 1.59
EFCAB3Q8N7B9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
EFCAB3Q8N7B9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
EFCAB3Q8N7B9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
EFCAB3Q8N7B9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
EFCAB3Q8N7B9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
EFCAB3Q8N7B9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
EFCAB3Q8N7B9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.97■■□□□ 1.59
EFCAB3Q8N7B9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCAB3Q8N7B9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCAB3Q8N7B9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCAB3Q8N7B9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.96■■□□□ 1.59
EFCAB3Q8N7B9 AC010864.1-201ENST00000609407 1511 ntBASIC24.96■■□□□ 1.59
EFCAB3Q8N7B9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
EFCAB3Q8N7B9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
EFCAB3Q8N7B9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
EFCAB3Q8N7B9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
EFCAB3Q8N7B9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
EFCAB3Q8N7B9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
EFCAB3Q8N7B9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.94■■□□□ 1.58
EFCAB3Q8N7B9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
EFCAB3Q8N7B9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.93■■□□□ 1.58
EFCAB3Q8N7B9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
EFCAB3Q8N7B9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.91■■□□□ 1.58
EFCAB3Q8N7B9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
EFCAB3Q8N7B9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.91■■□□□ 1.58
EFCAB3Q8N7B9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
EFCAB3Q8N7B9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
EFCAB3Q8N7B9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
EFCAB3Q8N7B9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms