Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDKAL1Q5VV42 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDKAL1Q5VV42 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDKAL1Q5VV42 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDKAL1Q5VV42 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CDKAL1Q5VV42 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDKAL1Q5VV42 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDKAL1Q5VV42 AC100797.4-201ENST00000631653 1827 ntBASIC28.24■■■□□ 2.11
CDKAL1Q5VV42 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CDKAL1Q5VV42 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.23■■■□□ 2.11
CDKAL1Q5VV42 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDKAL1Q5VV42 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.22■■■□□ 2.11
CDKAL1Q5VV42 LINC01003-201ENST00000564834 1764 ntBASIC28.22■■■□□ 2.11
CDKAL1Q5VV42 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.22■■■□□ 2.11
CDKAL1Q5VV42 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDKAL1Q5VV42 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.21■■■□□ 2.11
CDKAL1Q5VV42 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
CDKAL1Q5VV42 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.2■■■□□ 2.1
CDKAL1Q5VV42 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDKAL1Q5VV42 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDKAL1Q5VV42 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CDKAL1Q5VV42 MIR762-201ENST00000390236 83 ntBASIC28.19■■■□□ 2.1
CDKAL1Q5VV42 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDKAL1Q5VV42 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDKAL1Q5VV42 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CDKAL1Q5VV42 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
CDKAL1Q5VV42 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDKAL1Q5VV42 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
CDKAL1Q5VV42 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.16■■■□□ 2.1
CDKAL1Q5VV42 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDKAL1Q5VV42 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDKAL1Q5VV42 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDKAL1Q5VV42 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDKAL1Q5VV42 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDKAL1Q5VV42 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
CDKAL1Q5VV42 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDKAL1Q5VV42 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.14■■■□□ 2.1
CDKAL1Q5VV42 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.13■■■□□ 2.09
CDKAL1Q5VV42 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CDKAL1Q5VV42 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDKAL1Q5VV42 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.12■■■□□ 2.09
CDKAL1Q5VV42 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDKAL1Q5VV42 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.11■■■□□ 2.09
CDKAL1Q5VV42 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.11■■■□□ 2.09
CDKAL1Q5VV42 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.11■■■□□ 2.09
CDKAL1Q5VV42 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.11■■■□□ 2.09
CDKAL1Q5VV42 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDKAL1Q5VV42 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.1■■■□□ 2.09
CDKAL1Q5VV42 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
CDKAL1Q5VV42 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDKAL1Q5VV42 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.09■■■□□ 2.09
CDKAL1Q5VV42 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
CDKAL1Q5VV42 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDKAL1Q5VV42 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.09■■■□□ 2.09
CDKAL1Q5VV42 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.08■■■□□ 2.09
CDKAL1Q5VV42 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDKAL1Q5VV42 AP002414.2-202ENST00000590929 1450 ntBASIC28.08■■■□□ 2.09
CDKAL1Q5VV42 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDKAL1Q5VV42 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDKAL1Q5VV42 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDKAL1Q5VV42 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CDKAL1Q5VV42 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDKAL1Q5VV42 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.06■■■□□ 2.08
CDKAL1Q5VV42 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDKAL1Q5VV42 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDKAL1Q5VV42 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDKAL1Q5VV42 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.04■■■□□ 2.08
CDKAL1Q5VV42 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDKAL1Q5VV42 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.03■■■□□ 2.08
CDKAL1Q5VV42 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
CDKAL1Q5VV42 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.03■■■□□ 2.08
CDKAL1Q5VV42 SUZ12P1-203ENST00000578195 985 ntBASIC28.03■■■□□ 2.08
CDKAL1Q5VV42 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.03■■■□□ 2.08
CDKAL1Q5VV42 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDKAL1Q5VV42 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.02■■■□□ 2.08
CDKAL1Q5VV42 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDKAL1Q5VV42 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.02■■■□□ 2.08
CDKAL1Q5VV42 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDKAL1Q5VV42 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDKAL1Q5VV42 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
CDKAL1Q5VV42 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
CDKAL1Q5VV42 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDKAL1Q5VV42 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
CDKAL1Q5VV42 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDKAL1Q5VV42 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDKAL1Q5VV42 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28■■■□□ 2.07
CDKAL1Q5VV42 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28■■■□□ 2.07
CDKAL1Q5VV42 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDKAL1Q5VV42 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28■■■□□ 2.07
CDKAL1Q5VV42 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CDKAL1Q5VV42 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDKAL1Q5VV42 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDKAL1Q5VV42 AC135983.2-203ENST00000454486 1613 ntBASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms