Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
ATP6AP1LQ52LC2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP6AP1LQ52LC2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ATP6AP1LQ52LC2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6AP1LQ52LC2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.7■■□□□ 1.54
ATP6AP1LQ52LC2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.69■■□□□ 1.54
ATP6AP1LQ52LC2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.69■■□□□ 1.54
ATP6AP1LQ52LC2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.69■■□□□ 1.54
ATP6AP1LQ52LC2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6AP1LQ52LC2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
ATP6AP1LQ52LC2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6AP1LQ52LC2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6AP1LQ52LC2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.67■■□□□ 1.54
ATP6AP1LQ52LC2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP6AP1LQ52LC2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP6AP1LQ52LC2 MIR762-201ENST00000390236 83 ntBASIC24.66■■□□□ 1.54
ATP6AP1LQ52LC2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
ATP6AP1LQ52LC2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6AP1LQ52LC2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6AP1LQ52LC2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6AP1LQ52LC2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ATP6AP1LQ52LC2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
ATP6AP1LQ52LC2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.64■■□□□ 1.54
ATP6AP1LQ52LC2 AC100797.4-201ENST00000631653 1827 ntBASIC24.63■■□□□ 1.53
ATP6AP1LQ52LC2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP6AP1LQ52LC2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP6AP1LQ52LC2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.63■■□□□ 1.53
ATP6AP1LQ52LC2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ATP6AP1LQ52LC2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ATP6AP1LQ52LC2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.62■■□□□ 1.53
ATP6AP1LQ52LC2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP6AP1LQ52LC2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP6AP1LQ52LC2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.62■■□□□ 1.53
ATP6AP1LQ52LC2 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.62■■□□□ 1.53
ATP6AP1LQ52LC2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
ATP6AP1LQ52LC2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
ATP6AP1LQ52LC2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ATP6AP1LQ52LC2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.61■■□□□ 1.53
ATP6AP1LQ52LC2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ATP6AP1LQ52LC2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ATP6AP1LQ52LC2 LINC01003-201ENST00000564834 1764 ntBASIC24.6■■□□□ 1.53
ATP6AP1LQ52LC2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.6■■□□□ 1.53
ATP6AP1LQ52LC2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ATP6AP1LQ52LC2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ATP6AP1LQ52LC2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
ATP6AP1LQ52LC2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.59■■□□□ 1.53
ATP6AP1LQ52LC2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.59■■□□□ 1.53
ATP6AP1LQ52LC2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6AP1LQ52LC2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
ATP6AP1LQ52LC2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6AP1LQ52LC2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6AP1LQ52LC2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6AP1LQ52LC2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.57■■□□□ 1.52
ATP6AP1LQ52LC2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
ATP6AP1LQ52LC2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6AP1LQ52LC2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6AP1LQ52LC2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6AP1LQ52LC2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6AP1LQ52LC2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6AP1LQ52LC2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP6AP1LQ52LC2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.54■■□□□ 1.52
ATP6AP1LQ52LC2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.53■■□□□ 1.52
ATP6AP1LQ52LC2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ATP6AP1LQ52LC2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6AP1LQ52LC2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
ATP6AP1LQ52LC2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6AP1LQ52LC2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.51■■□□□ 1.51
ATP6AP1LQ52LC2 AC005559.1-201ENST00000589661 871 ntBASIC24.51■■□□□ 1.51
ATP6AP1LQ52LC2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
ATP6AP1LQ52LC2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6AP1LQ52LC2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6AP1LQ52LC2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.5■■□□□ 1.51
ATP6AP1LQ52LC2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.5■■□□□ 1.51
ATP6AP1LQ52LC2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.5■■□□□ 1.51
ATP6AP1LQ52LC2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ATP6AP1LQ52LC2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6AP1LQ52LC2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6AP1LQ52LC2 AP002414.2-202ENST00000590929 1450 ntBASIC24.49■■□□□ 1.51
ATP6AP1LQ52LC2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6AP1LQ52LC2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6AP1LQ52LC2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.48■■□□□ 1.51
ATP6AP1LQ52LC2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.47■■□□□ 1.51
ATP6AP1LQ52LC2 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.47■■□□□ 1.51
ATP6AP1LQ52LC2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6AP1LQ52LC2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.47■■□□□ 1.51
ATP6AP1LQ52LC2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6AP1LQ52LC2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms